Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A3006 |
Symbol | nrdI |
ID | 6485969 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 2928740 |
End bp | 2929150 |
Gene Length | 411 bp |
Protein Length | 136 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642738322 |
Product | ribonucleotide reductase stimulatory protein |
Protein accession | YP_002042051 |
Protein GI | 194445189 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1780] Protein involved in ribonucleotide reduction |
TIGRFAM ID | [TIGR00333] ribonucleoside-diphosphate reductase 2, operon protein nrdI |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 0.00316794 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAGCGCGC TCGTCTACTT CTCCAGCAGC TCTGAAAATA CGCACCGTTT TATGCAGCGT CTGGGGCTGC CCGCCACGCG TATTCCGCTC AATGAGCGGG AGCGAATTCG GGTAGACGAA CCGTACATTC TGGTTGTGCC GTCATACGGC GGCGGCGGGA TGGCCGGTGC GGTGCCGCGA CAGGTGATCC GCTTTTTAAA TGATGAACAC AACCGGGCGC GCATTCGCGG CGTCATTGCC TCCGGTAATC GCAATTTCGG CGATGCCTGG GGATGCGCTG GCGATGTGAT AGCACAAAAA TGCGGCGTAC CCTGGCTGTA CCGCTTTGAG CTCATGGGCA CACAACGCGA CATCGATAAC GTCCGAAAAG GAGTAAATGA ATTTTGGCAA CAACTACCCC GGAGCGCGTA A
|
Protein sequence | MSALVYFSSS SENTHRFMQR LGLPATRIPL NERERIRVDE PYILVVPSYG GGGMAGAVPR QVIRFLNDEH NRARIRGVIA SGNRNFGDAW GCAGDVIAQK CGVPWLYRFE LMGTQRDIDN VRKGVNEFWQ QLPRSA
|
| |