Gene SNSL254_A2773 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A2773 
Symbol 
ID6486395 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp2715257 
End bp2716618 
Gene Length1362 bp 
Protein Length453 aa 
Translation table11 
GC content56% 
IMG OID642738099 
ProductPTS system transporter subunit EIIC 
Protein accessionYP_002041833 
Protein GI194444653 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1263] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones78 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAAGA CGGCAGCGCT CGCCAGCGAC ATTTTACGTG GTATCGGCGG AGAGCAAAAT 
ATTCTGCGCC TGGAAAACTG TATGACGCGA GTCAGGGTGG AGGTACAGGA CGACAGCCAA
CTGGATATTC CGCGCTTAAA AGCGTTGCCT GGCGTCAGTG GATACGTAAA GCAAGGGGAG
CAACATCAGC TGATCGTTGG GCCGGGGAAG GCTGCGCAGG TGGTTGATGC GATGCGCGTG
CAGATTGCCG CAGGTGGTGT AAAGCCGGAC GATGCTATGG CGCGTACCAA ATCCGAGGCG
AAAGCGAAGT ATAAAGCGCC GATGAGCGAT GCGTTGCGTA AGCTGGCGAA TGTTTTTATA
CCGCTTATCC CCGCCTTTAT CGCATCCGGC TTGATTACCG GCATTATCAA CATTCTTAAA
CGTCCGGATA TCGTCGGCGA TGTTGCCGTC CACTATCCTA ACCTGCTGGG CCTGATGGGG
ATATTTGGTA GCGCGGTATT CGCTATCATG AACATTCTTG TTGGCGTCAA TACCGCGAAA
GTCTTTGGCG GATCGCAGGC GTTAGGCGGC GTGATGGCGG GGATCCTTTC CAGCCCGCAA
CTGGCGCAGA TTACGCTCTT TGGCGAGGTG CTTCAGCCGG GACGGGGCGG CGTTATCGCC
GTCCTGCTGG TGGTGGCGTT AATGTGCTGG ATTGAGCGCC AGTTCCGTAA GCTGCTGCCG
GGGTCGCTGG AGTTAATTCT TAACCCTTTA TTGACGACTG TTATCACCGG CGCGGTAGCG
ATTGTCGCTC TGCAACCGCT TGGCGGCTGG ATTTCAGACG CTATCGCTCA CGGCGCGTCC
TGGGCTATCG ATCGCGGCGG TTTTCTGGTG GGCGCGGTGT TAGCCGGAAC CTTCCTGCCG
TTGGTACTGA CCGGGCTGCA TCAGGGGCTG GTGCCTATTC ATGTGGAGCT GGTGCAAGCG
CACGGCTATA ACGCGCTGTT TCCCATCCTG GCGATGGCGG GCGTTGGTCA GATAGGCGCG
GCCATTGCCG TACTGATGAA AACCCGCAAT GCGCGGCTCA AAAAGGTGAT TAAAGGCGCG
CTTCCGGTCG GACTGCTGGG GATTGGCGAG CCGCTGATTT TTGGCGTCAC GCTGCCATTG
GGTAAGCCAT TTATTGGCGC TTGCCTCGGC GGCGCGGTAG GCGGGGCGTT GATCAGCTAC
TGGAAAGTGG CGACGGTAAT TACCTTTGGT ATTTCCGGTT TGCCGCTGGC ATTAACAATT
GTTGCCGGAA AAGTCCTGTT CTATCTGTTA GGCTATTTAA TAGCGGTAAT TGCCGGGTTT
ATTTTTACCT GGCTGCTGGG GTTCAATGAT CCAGAGGAGT AA
 
Protein sequence
MDKTAALASD ILRGIGGEQN ILRLENCMTR VRVEVQDDSQ LDIPRLKALP GVSGYVKQGE 
QHQLIVGPGK AAQVVDAMRV QIAAGGVKPD DAMARTKSEA KAKYKAPMSD ALRKLANVFI
PLIPAFIASG LITGIINILK RPDIVGDVAV HYPNLLGLMG IFGSAVFAIM NILVGVNTAK
VFGGSQALGG VMAGILSSPQ LAQITLFGEV LQPGRGGVIA VLLVVALMCW IERQFRKLLP
GSLELILNPL LTTVITGAVA IVALQPLGGW ISDAIAHGAS WAIDRGGFLV GAVLAGTFLP
LVLTGLHQGL VPIHVELVQA HGYNALFPIL AMAGVGQIGA AIAVLMKTRN ARLKKVIKGA
LPVGLLGIGE PLIFGVTLPL GKPFIGACLG GAVGGALISY WKVATVITFG ISGLPLALTI
VAGKVLFYLL GYLIAVIAGF IFTWLLGFND PEE