Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A2752 |
Symbol | |
ID | 6484316 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 2690360 |
End bp | 2691028 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642738080 |
Product | hypothetical protein |
Protein accession | YP_002041814 |
Protein GI | 194443804 |
COG category | [R] General function prediction only |
COG ID | [COG3683] ABC-type uncharacterized transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 91 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCACAGA ATTTTTATCG CGAGGAACAG ATGAAGCCAG TGAAACGCAG CGCCTTAACA CTATTTCTTG CCGTTTTATC TTTCGTGGCG GCGGCGCATC CGCACAGCTT CATCCGTCTG CAAACGCAGG TGGTCAGTGA AAATGAGCAA TTTGTGGCGT TAAAAATGCG CTGGACAATG GACGCGCTGA CGTCCGCAGA TCTGCTGTAT GACGCCGGAA ACGCGGCACC GGGGTCAGAA ATATGGAAAA AGTTGGCGGC GGAAGTGATG GCTAACGTAC TTGGGCAGCA CTACTTTACA GAAGTGTGGC GCAATGGCGC GAAAGTGAAG TTTAAAAACA GGCCGACAGA ATACGGTATG ACGCGTGACG CGCATCAGGC GGTATTGACC TTTACGCTAC CGCTGGCTGA ACCGCAGCCG TTAAGCGGAC AGACTTATAC CTTTTCAACG TTTGATCCCT CTTATTATGT CGATATGCAT TATGACCAGG ACAGCGATAT CACGATGCCG GAACCGCTGC GCGAAAAGTG TCGGATTCAG GTTTATACTC CTGCGCCCGG CGAAGAGACG CTACGTTTCG CCCAGTCGCT GGATAAAGAG GACGCGCCGC CGGAGGATAT GGATTTAGGT AAACAGTTTG CCCAAACGGT GACCTTGCAA TGTCAGTAA
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Protein sequence | MSQNFYREEQ MKPVKRSALT LFLAVLSFVA AAHPHSFIRL QTQVVSENEQ FVALKMRWTM DALTSADLLY DAGNAAPGSE IWKKLAAEVM ANVLGQHYFT EVWRNGAKVK FKNRPTEYGM TRDAHQAVLT FTLPLAEPQP LSGQTYTFST FDPSYYVDMH YDQDSDITMP EPLREKCRIQ VYTPAPGEET LRFAQSLDKE DAPPEDMDLG KQFAQTVTLQ CQ
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