Gene SNSL254_A2752 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A2752 
Symbol 
ID6484316 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp2690360 
End bp2691028 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content52% 
IMG OID642738080 
Producthypothetical protein 
Protein accessionYP_002041814 
Protein GI194443804 
COG category[R] General function prediction only 
COG ID[COG3683] ABC-type uncharacterized transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones91 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCACAGA ATTTTTATCG CGAGGAACAG ATGAAGCCAG TGAAACGCAG CGCCTTAACA 
CTATTTCTTG CCGTTTTATC TTTCGTGGCG GCGGCGCATC CGCACAGCTT CATCCGTCTG
CAAACGCAGG TGGTCAGTGA AAATGAGCAA TTTGTGGCGT TAAAAATGCG CTGGACAATG
GACGCGCTGA CGTCCGCAGA TCTGCTGTAT GACGCCGGAA ACGCGGCACC GGGGTCAGAA
ATATGGAAAA AGTTGGCGGC GGAAGTGATG GCTAACGTAC TTGGGCAGCA CTACTTTACA
GAAGTGTGGC GCAATGGCGC GAAAGTGAAG TTTAAAAACA GGCCGACAGA ATACGGTATG
ACGCGTGACG CGCATCAGGC GGTATTGACC TTTACGCTAC CGCTGGCTGA ACCGCAGCCG
TTAAGCGGAC AGACTTATAC CTTTTCAACG TTTGATCCCT CTTATTATGT CGATATGCAT
TATGACCAGG ACAGCGATAT CACGATGCCG GAACCGCTGC GCGAAAAGTG TCGGATTCAG
GTTTATACTC CTGCGCCCGG CGAAGAGACG CTACGTTTCG CCCAGTCGCT GGATAAAGAG
GACGCGCCGC CGGAGGATAT GGATTTAGGT AAACAGTTTG CCCAAACGGT GACCTTGCAA
TGTCAGTAA
 
Protein sequence
MSQNFYREEQ MKPVKRSALT LFLAVLSFVA AAHPHSFIRL QTQVVSENEQ FVALKMRWTM 
DALTSADLLY DAGNAAPGSE IWKKLAAEVM ANVLGQHYFT EVWRNGAKVK FKNRPTEYGM
TRDAHQAVLT FTLPLAEPQP LSGQTYTFST FDPSYYVDMH YDQDSDITMP EPLREKCRIQ
VYTPAPGEET LRFAQSLDKE DAPPEDMDLG KQFAQTVTLQ CQ