Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A2629 |
Symbol | pdxK |
ID | 6484295 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 2546592 |
End bp | 2547458 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642737962 |
Product | pyridoxal kinase |
Protein accession | YP_002041696 |
Protein GI | 194443635 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2240] Pyridoxal/pyridoxine/pyridoxamine kinase |
TIGRFAM ID | [TIGR00687] pyridoxal kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00675683 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 87 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGACAAG AGAGTGATAT TCAGTCAGTG CTCTTCGACG ACAACCATCG GGCGTTACAG ACCGATATCG TCGCCGTCCA GTCACAGGTC GTGTACGGCA GCGTAGGCAA CAGCATCGCT GTTCCGGCCA TTAAAGCGCA GGGATTACGC GTGACGGCGG TCCCGACGGT GCTGTTCAGC AATACGCCGC ACTATAAAAC GTTTTATGGC GGCATTATTC CCGCCGAGTG GTTTGCAGGC TACCTTACGG CGTTGAATGA GCGCGATGCG TTACGTGAAT TAAAAGCGAT TACCACCGGT TACATGGGCA GCGCAGACCA AATTGTCTTG CTGTCGAAGT GGCTAATGGC GATCCGGGCT TCGCATCCGG AGGTGTGTAT TCTTGTCGAT CCGGTCATTG GCGATACCGA CAGTGGAATG TATGTGCAGG CGGAAATTCC GCAGGCTTAT CGCACACATT TGTTGCCGCA GGCGCAGGGG CTAACGCCGA ACGTATTTGA GCTGGAGATG CTGAGTGGTA AACCGTGCCG CACGCTGGAA GAGGCGTTGG CGGCGGCGCA ATCGCTGCTT TCCGATACGC TGAAATGGGT GGTTATCACC AGCGCGCCGG GCGAATCTCT GGAGACCATA ACGGTTGCTG TCGTTACTGC GCAGGTCGTA GAGGTCTTTG CCCATCCGCG GGTGGCGACG GAATTAAAAG GGACGGGAGA TCTCTTCTGC GCCGAGCTGG TCAGCGGTAT TGTGCAGGGG AAAAAACTGA CGACCGCGGC AAAAGATGCG GCGCAGCGCG TGCTGGAGGT GATGACCTGG ACACAGCAGT GTGGCTGTGA TGAGTTAATT CTGCCGCCAG CAGGGGAGGC GCGATGA
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Protein sequence | MGQESDIQSV LFDDNHRALQ TDIVAVQSQV VYGSVGNSIA VPAIKAQGLR VTAVPTVLFS NTPHYKTFYG GIIPAEWFAG YLTALNERDA LRELKAITTG YMGSADQIVL LSKWLMAIRA SHPEVCILVD PVIGDTDSGM YVQAEIPQAY RTHLLPQAQG LTPNVFELEM LSGKPCRTLE EALAAAQSLL SDTLKWVVIT SAPGESLETI TVAVVTAQVV EVFAHPRVAT ELKGTGDLFC AELVSGIVQG KKLTTAAKDA AQRVLEVMTW TQQCGCDELI LPPAGEAR
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