Gene SNSL254_A2571 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A2571 
Symbol 
ID6484158 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand- 
Start bp2491874 
End bp2492683 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content54% 
IMG OID642737906 
Producthypothetical protein 
Protein accessionYP_002041647 
Protein GI194443451 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones77 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAATT TTTATGATCT GTTTATGGTC TCCCCGCTGC TGCTGGTGGT GCTGTTTTTT 
GTCGCCGTAC TGGCAGGATT TATCGATTCT ATCGCCGGGG GCGGAGGGCT GCTCACTATC 
CCTGCGCTGA TGGCCGCCGG GATGTCGCCG GCAAACGCGC TGGCGACCAA TAAATTACAG 
GCGTGCGGCG GCTCCCTCTC GTCTTCGCTC TATTTTATTC GCCGTAAAGT GGTAAACCTG 
GCCGAGCAAA AGCTCAATAT TCTGATGACG TTCATTGGCT CGATGAGCGG CGCGCTGCTG 
GTGCAGCACG TGCAGGCGGA TATTTTGCGC CAGATCTTGC CTATCCTGGT GATTTTCATC 
GGCCTCTATT TTTTATTGAT GCCGAAGCTG GGCGAGGAAG ATCGCCAGCG CCGCCTGTAT 
GGATTACCGT TCGCGCTGAT AGCCGGGGGA TGCGTCGGGT TTTACGACGG CTTTTTCGGG 
CCTGCCGCCG GGTCGTTTTA CGCTCTGGCG TTTGTCACCT TATGTGGCTA TAACCTGGCG 
AAATCCACGG CACATGCCAA AGTGCTTAAC GCTACTTCCA ACGTTGGCGG CCTGCTGTTA 
TTTATCATCG GCGGCAAAGT GATCTGGGCG ACGGGCTTCG TGATGCTGGT TGGTCAGTTT 
TTAGGGGCGC GAATGGGGTC GCGTCTGGTG TTGAGCAAAG GCCAAAAACT TATCAGACCG 
ATGATCGTTA TTGTCTCGGC GGTAATGAGC GCCAGGTTAC TTTATGATAG CCACGGACAG 
GAGATCCTCC ACTGGTTGGG GATGAATTAA
 
Protein sequence
MDNFYDLFMV SPLLLVVLFF VAVLAGFIDS IAGGGGLLTI PALMAAGMSP ANALATNKLQ 
ACGGSLSSSL YFIRRKVVNL AEQKLNILMT FIGSMSGALL VQHVQADILR QILPILVIFI 
GLYFLLMPKL GEEDRQRRLY GLPFALIAGG CVGFYDGFFG PAAGSFYALA FVTLCGYNLA 
KSTAHAKVLN ATSNVGGLLL FIIGGKVIWA TGFVMLVGQF LGARMGSRLV LSKGQKLIRP 
MIVIVSAVMS ARLLYDSHGQ EILHWLGMN