Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A2258 |
Symbol | |
ID | 6486255 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 2165534 |
End bp | 2166517 |
Gene Length | 984 bp |
Protein Length | 327 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642737605 |
Product | chain length determinant protein |
Protein accession | YP_002041347 |
Protein GI | 194442287 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3765] Chain length determinant protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 0.0308231 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACAGTGG ATAGTAATAC GTCTTCCGGG CGTGGGAACG ATCCGGAACA GATTGATTTG ATTGAGTTAT TGCTACAGTT ATGGCGTGGG AAGATGACCA TTATTGTAGC CGTTATTATC GCCATTTTGC TGGCCGTAGG CTACCTGATG ATAGCCAAAG AAAAATGGAC ATCCACGGCG ATTATTACCC AACCTGATGC CGCGCAGGTT GCCACCTATA CCAATGCGCT CAACGTCTTG TATGGCGGGA ATGCCCCCAA AATCTCTGAA GTGCAGGCGA ATTTTATAAG CCGCTTTAGC TCTGCGTTTT CCGCATTATC GGAAGCGCTG GATAATCAGA AAGAGCCGGA AAAGCTCACC ATTGAACAGT CGGTAAAGGG GCAGGCGCTG CCGCTCTCGG TTTCTTATGT GAGTACTACC GCTGAAGGCG CGCAGCGTCG GCTGGCGGAA TATATCCAAC AGGTGGATGA AGAGGTCGCT AAGGAACTGG AAGTTGACCT GAAAGATAAC ATCACGCTGC AAACTAAAAC GTTGCAGGAG TCCCTTGAGA CGCAGGAAGT TGTGGCGCAG GAGCAAAAAG ATCTGCGTAT TAAGCAAATC GAAGAAGCGT TGCGCTATGC GGATGAGGCA AAAATCACGC AGCCGCAGAT TCAGCAAACC CAGGATGTTA CCCAGGACAC GATGTTCCTG TTGGGGAGCG ATGCGCTAAA ATCGATGATA CAGAACGAAG CGACGCGTCC ACTGGTCTTT TCTCCGGCCT ATTTCCAGAC GAAGCAGACA CTGCTGGACA TTAAAAATCT GAAAGTGACT GCCGATACGG TGCACGTCTA TCGTTATGTG ATGAAGCCGA CGCTGCCGGT CCGTCGCGAT AGCCCGAAAA AAGCCATTAC CCTCGTGCTG GCTGTATTGC TGGGTGGGAT GATCGGTGCC GGGATTGTGC TGGGACGCAA TGCGCTACGT AGCTATAAGC CAAAAGCCTT GTAA
|
Protein sequence | MTVDSNTSSG RGNDPEQIDL IELLLQLWRG KMTIIVAVII AILLAVGYLM IAKEKWTSTA IITQPDAAQV ATYTNALNVL YGGNAPKISE VQANFISRFS SAFSALSEAL DNQKEPEKLT IEQSVKGQAL PLSVSYVSTT AEGAQRRLAE YIQQVDEEVA KELEVDLKDN ITLQTKTLQE SLETQEVVAQ EQKDLRIKQI EEALRYADEA KITQPQIQQT QDVTQDTMFL LGSDALKSMI QNEATRPLVF SPAYFQTKQT LLDIKNLKVT ADTVHVYRYV MKPTLPVRRD SPKKAITLVL AVLLGGMIGA GIVLGRNALR SYKPKAL
|
| |