Gene SNSL254_A2258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A2258 
Symbol 
ID6486255 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp2165534 
End bp2166517 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content51% 
IMG OID642737605 
Productchain length determinant protein 
Protein accessionYP_002041347 
Protein GI194442287 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3765] Chain length determinant protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value0.0308231 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGTGG ATAGTAATAC GTCTTCCGGG CGTGGGAACG ATCCGGAACA GATTGATTTG 
ATTGAGTTAT TGCTACAGTT ATGGCGTGGG AAGATGACCA TTATTGTAGC CGTTATTATC
GCCATTTTGC TGGCCGTAGG CTACCTGATG ATAGCCAAAG AAAAATGGAC ATCCACGGCG
ATTATTACCC AACCTGATGC CGCGCAGGTT GCCACCTATA CCAATGCGCT CAACGTCTTG
TATGGCGGGA ATGCCCCCAA AATCTCTGAA GTGCAGGCGA ATTTTATAAG CCGCTTTAGC
TCTGCGTTTT CCGCATTATC GGAAGCGCTG GATAATCAGA AAGAGCCGGA AAAGCTCACC
ATTGAACAGT CGGTAAAGGG GCAGGCGCTG CCGCTCTCGG TTTCTTATGT GAGTACTACC
GCTGAAGGCG CGCAGCGTCG GCTGGCGGAA TATATCCAAC AGGTGGATGA AGAGGTCGCT
AAGGAACTGG AAGTTGACCT GAAAGATAAC ATCACGCTGC AAACTAAAAC GTTGCAGGAG
TCCCTTGAGA CGCAGGAAGT TGTGGCGCAG GAGCAAAAAG ATCTGCGTAT TAAGCAAATC
GAAGAAGCGT TGCGCTATGC GGATGAGGCA AAAATCACGC AGCCGCAGAT TCAGCAAACC
CAGGATGTTA CCCAGGACAC GATGTTCCTG TTGGGGAGCG ATGCGCTAAA ATCGATGATA
CAGAACGAAG CGACGCGTCC ACTGGTCTTT TCTCCGGCCT ATTTCCAGAC GAAGCAGACA
CTGCTGGACA TTAAAAATCT GAAAGTGACT GCCGATACGG TGCACGTCTA TCGTTATGTG
ATGAAGCCGA CGCTGCCGGT CCGTCGCGAT AGCCCGAAAA AAGCCATTAC CCTCGTGCTG
GCTGTATTGC TGGGTGGGAT GATCGGTGCC GGGATTGTGC TGGGACGCAA TGCGCTACGT
AGCTATAAGC CAAAAGCCTT GTAA
 
Protein sequence
MTVDSNTSSG RGNDPEQIDL IELLLQLWRG KMTIIVAVII AILLAVGYLM IAKEKWTSTA 
IITQPDAAQV ATYTNALNVL YGGNAPKISE VQANFISRFS SAFSALSEAL DNQKEPEKLT
IEQSVKGQAL PLSVSYVSTT AEGAQRRLAE YIQQVDEEVA KELEVDLKDN ITLQTKTLQE
SLETQEVVAQ EQKDLRIKQI EEALRYADEA KITQPQIQQT QDVTQDTMFL LGSDALKSMI
QNEATRPLVF SPAYFQTKQT LLDIKNLKVT ADTVHVYRYV MKPTLPVRRD SPKKAITLVL
AVLLGGMIGA GIVLGRNALR SYKPKAL