Gene SNSL254_A1953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1953 
Symbol 
ID6485124 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1910033 
End bp1910467 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content44% 
IMG OID642737320 
Producthypothetical protein 
Protein accessionYP_002041070 
Protein GI194443660 
COG category[S] Function unknown 
COG ID[COG3100] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.192868 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones91 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCGTGTT TGACATCCTG GCCTTACTCA ATTTGCTATT TATCATCTCC GATACGGAGT 
GATATTCCGA AGTCCAGAAG GCATGTTATA GTCAGTATTA TATTGAGGCA AGTCACCATC
CCGTTAATTC AGAGTAAAAG TATGTTTTGT GTGATCTATC GAAGTAGCAA GCGCGATCAA
ACCTATTTGT ATGTCGAAAA AAAAGACGAT TTTTCGCGAG TGCCTGAAGC GTTGATGAAA
GGATTCGGTC AGCCGCAGTT AGCGATGATG CTGCCGCTTG ATGGACGTAA AAAATTAGTC
AATGCCGAGC TCGAAAAAGT AAAACAGGCG TTAAGCGAGC AGGGCTATTA TTTACAATTG
CCGCCGCCGC CGGAAGATTT GCTGAAACAA CATCTTTCTT CGGTAGGACA AAATACGTCG
TCCGCTGACC GTTAA
 
Protein sequence
MACLTSWPYS ICYLSSPIRS DIPKSRRHVI VSIILRQVTI PLIQSKSMFC VIYRSSKRDQ 
TYLYVEKKDD FSRVPEALMK GFGQPQLAMM LPLDGRKKLV NAELEKVKQA LSEQGYYLQL
PPPPEDLLKQ HLSSVGQNTS SADR