Gene SNSL254_A1714 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1714 
Symbol 
ID6484924 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand
Start bp1686306 
End bp1687076 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content48% 
IMG OID642737094 
Producthypothetical protein 
Protein accessionYP_002040846 
Protein GI194442647 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2173] D-alanyl-D-alanine dipeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones78 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAAAAT GCGTATCTTC TTTCCTCCTG TTCAGCCTGT TGTCCGTTCA GGCAATGTCA 
GCTGAAAACC ATATTGATCT CCACCAGCCA AAAGACTTTG TCGATATTAC TACGGTCGCC
CCCGACGTAC AGGTAGACAT GCGATACTTC AGTTCCCATA ACTTTATTGG TCGCCCCATT
AAAGGCTATA ACGCGCCTGT TTGCCTGTTA ACACGACCAG CCGCGAACGC AGTGAAGCAG
GTCGCCGATC GTTTACGCCC CTTCGGACTT ACCTTAAAAA TATATGATTG CTACCGTCCG
CAAAGCGCAG TGAACGACTT TATCGCGTGG GCCAAAGATC CTTCTCAAAA CCAAATGAAA
AACGAATTTT ATCCGCAGGT AGAGAAAAAT CGTCTGTTTG AGGAAGGTTA TCTTGCCGCC
AGATCCGGCC ACAGTCGGGG AAGTACGCTT GATCTAACGA TTGTTCCACT TGACAGTAAA
ATACCAATAT ACGATCCCGG ACGACCACTG GTGAATTGTA CTGCGTCCGC GGCGCAACGC
TCGCCAGATA ATAGTCTGGA TTTTGGTACC GGCTTTGACT GTTTTAGTCC GTTATCCCAT
CCCGATAATG TCATGCTTAC CGCTCAGCAA CGCGCAAATA GGTTGTTATT ACAAACATTG
ATGCGTGATG CGGGTTTTAC GCCACTGGAT ACTGAATGGT GGCACTTCTC TCTTACTCAT
GAACCATACC CGAACACTTG GTTTGACTTT CCCGTTAAGC AGAGACCCTG A
 
Protein sequence
MVKCVSSFLL FSLLSVQAMS AENHIDLHQP KDFVDITTVA PDVQVDMRYF SSHNFIGRPI 
KGYNAPVCLL TRPAANAVKQ VADRLRPFGL TLKIYDCYRP QSAVNDFIAW AKDPSQNQMK
NEFYPQVEKN RLFEEGYLAA RSGHSRGSTL DLTIVPLDSK IPIYDPGRPL VNCTASAAQR
SPDNSLDFGT GFDCFSPLSH PDNVMLTAQQ RANRLLLQTL MRDAGFTPLD TEWWHFSLTH
EPYPNTWFDF PVKQRP