Gene SNSL254_A1179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_A1179 
Symbol 
ID6484589 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_011080 
Strand+ 
Start bp1173525 
End bp1174052 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content43% 
IMG OID642736581 
Producttail fibre assembly protein 
Protein accessionYP_002040339 
Protein GI194444669 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.376111 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value0.114293 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATATAA TGGAATTAAA AAACGTAACC AGATACATTC CTGACGACCA GGACTACGAT 
AATAACTTTC TGTATTTTCG TAGTGAAGAT GGTCAGGACT TTTACGAATC ACTGAGTAAA 
TTCACCAAAA AATATAAGCT GTGCATTGAC TCCGAAAATA TAATACGTTC TGTAGCCGAA 
GATGTATCGC GCCTTTATCC GGCAGGTTTT TCGGTTGTTG AGGTCAATAA ACTACCAGCC 
GGATTTAATA TCTATGGCGA CTGGAAATAT TCGAACGGCA CTGTTCTGGC TGTTCCCGTT 
GACTATCAGG CTAAGGCCGA AACCACCCGG CAGAAACTAC TGGATGGAGC TAACAGCATC 
ATTGCCGACT GGCGAACGGA ACTGGCGCTG GGTGAAATCA GTGACGACGA TAAGGCCACC 
CTGACTAAAT GGATGTCGTA TATCAAGGGA CTTAAATCAC TGGATTTAAC AGGAATTTCA 
GACGAGGCCA CCTTTAATAA AATACAGTGG CCTGCATTAC CACAGTAA
 
Protein sequence
MNIMELKNVT RYIPDDQDYD NNFLYFRSED GQDFYESLSK FTKKYKLCID SENIIRSVAE 
DVSRLYPAGF SVVEVNKLPA GFNIYGDWKY SNGTVLAVPV DYQAKAETTR QKLLDGANSI 
IADWRTELAL GEISDDDKAT LTKWMSYIKG LKSLDLTGIS DEATFNKIQW PALPQ