| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A1076 |
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| Symbol | |
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| ID | 6482236 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 1084896 |
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| End bp | 1085645 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642736481 |
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| Product | gifsy-2 prophage VmtV |
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| Protein accession | YP_002040240 |
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| Protein GI | 194443957 |
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| COG category | [N] Cell motility |
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| COG ID | [COG5492] Bacterial surface proteins containing Ig-like domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 0.016765 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGACA CGACAATTCC TAATCCACTT GCGCCGGTAA AAGGCGCAAA TACCACATTC
TGGATGTACA ACAGCGAGGG TGATCCGTTC GCCAGCCCGC TAAGTGATAA TAACTGGCTG
AGGCTGGCAA ACGTAAAAGA CCTGCAGCCG GGAGAACTGA CGGCAGATGC AGAAGATAAT
AACTATCTTG ATGACGAGAA CGCTGACTGG AAAAGTACCA CACAGGGACA GAAGTCTGCC
GGGGATACTT CTGTGACGCT GGCGTGGAAG CCAGGTGAGG ACGTACAGAA AAAGCTTATT
CAACTGTTCA CGACCGGGCA GAAGCGCGGA TTCCGGATCA AGTATCCGAA CGGCACTGTT
GATGTGTTCA GAGGCTGGGT GAGCTCGCTG GGGAAAACGG TGCAGAGTAA GGATGAGATC
GCCCGTACAG TAAAAATTAC CAGTGTGGGC CGTCCGTACA TGGCTGAAGA GGATGCACCG
GAAGTGGTTA GTGTTACCGG ACTGACAGTG GAACCGACAA ATGCCACCGT GAAGGTCGGC
GCCACAACAG CGGTTACGTT CACGGTGAAA CCGGATAACG TGACAGATAA ATCACTGCGT
ATCGCAACGT CAGATCCGAC TACAGCCACC GTCACGCAGG CGGAAAATAT TGCCACTGTA
AAAGGTGTTA AGGCAGGTAC AGTGAAAATT ATTGGCATGA CAACAGACGG TAATTTTACC
GCTATTGCGG ATATTACTGT TCAGGCATAA
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| Protein sequence | MTDTTIPNPL APVKGANTTF WMYNSEGDPF ASPLSDNNWL RLANVKDLQP GELTADAEDN
NYLDDENADW KSTTQGQKSA GDTSVTLAWK PGEDVQKKLI QLFTTGQKRG FRIKYPNGTV
DVFRGWVSSL GKTVQSKDEI ARTVKITSVG RPYMAEEDAP EVVSVTGLTV EPTNATVKVG
ATTAVTFTVK PDNVTDKSLR IATSDPTTAT VTQAENIATV KGVKAGTVKI IGMTTDGNFT
AIADITVQA
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