Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A0940 |
Symbol | |
ID | 6483768 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | - |
Start bp | 944927 |
End bp | 946138 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642736348 |
Product | inner membrane protein YbjJ |
Protein accession | YP_002040108 |
Protein GI | 194443309 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0738] Fucose permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 95 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGTCC TCTCCTCACG TAACGCCTTA AAACGCCGTA CCTGGGCGCT GTTTATGTTC TTCTTTTTAC CCGGACTGCT GATGGCCTCC TGGGCAACCC GAACGCCTGC TATTCGGGAT ATTCTTTCCG TCTCTACCGC GGAAATGGGG GCGGTCTTAT TCGGGCTTTC TATCGGTTCA ATGAGCGGTA TTCTTTGTTC CGCCTGGCTG GTGAAACGAT TTGGCACCCG GAAGGTTATT CGCACGACGA TGACCTGCGC AGTAGGCGGG ATGGTTATTC TTAGCGTCGC GCTGTGGTGC GCCTCGCCGC TGATTTTTGC CCTTGGATTA GCCGTTTTCG GCGCCAGTTT TGGCGCCGCC GAAGTGGCGA TTAATGTCGA AGGCGCGGCG GTCGAACGCG AGCTGAATAA AACCGTTCTG CCGATGATGC ATGGTTTTTA CAGTTTCGGC ACGCTGGCGG GCGCTGGTGT CGGCATGGCG TTAACCGCAT TAAGCGTCCC GGCTAACATC CATATCATCC TCGCGGCTGC CGTGGCGATC GCGCCCATTT TCATCGCCAT TCGGGCGATC CCTGACGGTA CGGGTAAAAA CGCATCGGAA GATTCTCACC TTCAGGAAAA AGGATTACCT TTTTATCGGG ACATCCAGCT TTTGCTTATT GGCGTGGTGG TGCTGGCAAT GGCATTCGCC GAAGGATCTG CGAATGACTG GCTACCGCTA CTGATGGTAG ACGGACACGG TTTTAGCCCA ACCTCCGGCT CTCTGATCTA CGCCGGTTTC ACGCTTGGTA TGACCGTTGG CCGCTTTACC GGCGGCTGGT TTATTGACCG CTATAGCCGG GTGACGGTTG TTCGCGCCAG CGCGTTGATG GGAGCGTTGG GCATTGGCCT GATTATTTTT GTCGATAGCG ACTGGGTCGC CGGCGTCTCG GTCATTCTTT GGGGCTTAGG CGCTTCGCTC GGCTTCCCGC TGACCATTTC CGCCGCCAGC GATACCGGTC CCGACGCGCC GACGCGCGTG AGCGTTGTCG CCACGACCGG CTATCTGGCG TTTTTGGTCG GGCCGCCGCT GTTGGGCTAT CTGGGAGAGC ATTATGGATT ACGCAGCGCC ATGATGGTTG TGCTGGCGCT GGTTATTCTG GCGGCGCTGG TGGCGAAGGC CGTCGCCAAA CCTGTATCGA CTCCGCAACC GGTGATGGAG CATAACGCAT GA
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Protein sequence | MTVLSSRNAL KRRTWALFMF FFLPGLLMAS WATRTPAIRD ILSVSTAEMG AVLFGLSIGS MSGILCSAWL VKRFGTRKVI RTTMTCAVGG MVILSVALWC ASPLIFALGL AVFGASFGAA EVAINVEGAA VERELNKTVL PMMHGFYSFG TLAGAGVGMA LTALSVPANI HIILAAAVAI APIFIAIRAI PDGTGKNASE DSHLQEKGLP FYRDIQLLLI GVVVLAMAFA EGSANDWLPL LMVDGHGFSP TSGSLIYAGF TLGMTVGRFT GGWFIDRYSR VTVVRASALM GALGIGLIIF VDSDWVAGVS VILWGLGASL GFPLTISAAS DTGPDAPTRV SVVATTGYLA FLVGPPLLGY LGEHYGLRSA MMVVLALVIL AALVAKAVAK PVSTPQPVME HNA
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