Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A0929 |
Symbol | |
ID | 6484987 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 934654 |
End bp | 936339 |
Gene Length | 1686 bp |
Protein Length | 561 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 642736339 |
Product | electron transfer flavoprotein-ubiquinone oxidoreductase |
Protein accession | YP_002040099 |
Protein GI | 194445148 |
COG category | [C] Energy production and conversion |
COG ID | [COG0644] Dehydrogenases (flavoproteins) [COG2440] Ferredoxin-like protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.460207 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 86 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACGATA CACTTTCTAA TACCCAGCAA TCACGTGAGA CAATAGAATG TGATGTTCTT ATTGTGGGAG CAGGACCCGC CGGATTATCT GCAGCTCTTA AACTTAAATT ACAGGCAAAT GACGCAGGAA AAGAACTGTC CATTATCGTC CTTGATAAAG GAGCTGAGCC TGGTTCTCAT ATTCTCAGTG GGGCAGTCAT GGATCCCCGA GCGCTGAATG AACTAATTCC TGATTGGCAG GAAAGAGGCG CACCCATTAA ACAGCCTGTT ACTCAGGATA AATTACTGTT ACTGACGAAT GAAAAATGTA TTAATTTGCC GGATGCATTG ATTCCTGATA ATTTTCGCAA CCATGGAAAC TTTATCGTAA GCCTCGGTAA TCTCATTAAA TGGCTCGCCG GTCAGGCAGA AACGTCAGGC GTGGATATTT ATGCAGGCTT TTCGGCAACT GAGATACTGT ATGATCAGGA TACTAACATT ATCGGTGTAG TAACTGGTGA TATGGGACGT CATCGGGATG GCAGCAAGAA AGAGGGGTTC CTGAGTGGAA TAGAAATTCT GGCAAAATAT ACAATTTTTG CCGAAGGGGC CCGCGGTAGT CTGGCTAAAG AACTGATCAA AAAATTTCAT CTTGATACAG GCAAAGCACC CCAGAGTTTT AGCATAGGCA TAAAAGAGTT GTGGGAGGTT CCATCAGACC AGTCCCATCC GGGGCTTGTA ATTCACACCA CAGGTTGGCC TCTGGATAAA GAGTCGTTCG GGGGTGGGTT TCTCTATCAT CTTAATGATA ATAAAATTGC ACTAGGTTTG GTTGTGGGAC TTGATTATTC AAATCCCTGG TTAAGCCCTT TTCAGGAAAT GCAGCGCCTG AAAACACACC CTTCTATACG CAAATACATT GACCGGGGTA AGCGTATTGG TTATGGCGCA AGAGCAATCA ATAACGGCGG GATTGCGTCT ATGCCTGATC CCTGTTTACC TGGTGGTCTG CTGATTGGTT GTAATGCCGG TACGCTCAAT GCAAGTAGAA TCAAGGGCAT CCATACAGCT ATCAAAAGTG GCATGATAGC GGCTGACGCT ATATTTAATG CTTTGCTGGA CAACAGGAAA AACGACATAC TGACAGAATA TCAAACATTA CTGCGACAGA GCTGGCTTTG GCAGGAACTG GAAAATGGTA GTAATTTCAA ACCCTGGTTT AAAAAAGGGC GTGTGATAGG TTTTATCATG AGTGGCATTG AGCATTGGCT GCTTCCCCGA ATGGGTATAA AAAAAATCCC CTGGCGTGTA AAAAATAACC GACCGGACAA TATCACTCTG CAACCGGCCA ACAAAAGCCA GAAAAAACTG TACGACAAAC CTGACGGTAA ACTGACGTTT GATATTTTGT CATCCGTCTA TCTCAGTAAC ACCTGGCATG ATGACGACCA GCCAGTACAT TTGAAAATCA GTGATCAGAA TATCCCTATA TCCATTAATC TGGATATTTA TGGTGGCCCC GAAGAACGAT ATTGCCCTGC CGGAGTATAT GAATTTTTAC AGGATAGTGA AACACAAAAT ATGCGTCTGC AAATAAATTC ACAGAACTGT ATTCACTGTA AAGTTTGTGA CATTAAAGAT CCTAAACAAA ATATAACCTG GACTACGCCT GAAGGTGGCA ACGGACCAAA TTATACAGGG ATGTAA
|
Protein sequence | MNDTLSNTQQ SRETIECDVL IVGAGPAGLS AALKLKLQAN DAGKELSIIV LDKGAEPGSH ILSGAVMDPR ALNELIPDWQ ERGAPIKQPV TQDKLLLLTN EKCINLPDAL IPDNFRNHGN FIVSLGNLIK WLAGQAETSG VDIYAGFSAT EILYDQDTNI IGVVTGDMGR HRDGSKKEGF LSGIEILAKY TIFAEGARGS LAKELIKKFH LDTGKAPQSF SIGIKELWEV PSDQSHPGLV IHTTGWPLDK ESFGGGFLYH LNDNKIALGL VVGLDYSNPW LSPFQEMQRL KTHPSIRKYI DRGKRIGYGA RAINNGGIAS MPDPCLPGGL LIGCNAGTLN ASRIKGIHTA IKSGMIAADA IFNALLDNRK NDILTEYQTL LRQSWLWQEL ENGSNFKPWF KKGRVIGFIM SGIEHWLLPR MGIKKIPWRV KNNRPDNITL QPANKSQKKL YDKPDGKLTF DILSSVYLSN TWHDDDQPVH LKISDQNIPI SINLDIYGGP EERYCPAGVY EFLQDSETQN MRLQINSQNC IHCKVCDIKD PKQNITWTTP EGGNGPNYTG M
|
| |