| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A0623 |
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| Symbol | |
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| ID | 6485395 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 631600 |
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| End bp | 633570 |
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| Gene Length | 1971 bp |
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| Protein Length | 656 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642736038 |
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| Product | lipase 1 |
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| Protein accession | YP_002039811 |
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| Protein GI | 194443366 |
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| COG category | [I] Lipid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG3240] Phospholipase/lecithinase/hemolysin |
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| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAAA AGCGTACCCT GCTAAAATAC GGCATACTCT CGCTGGCGCT GGCCGCGCCA
TTATCTGCCT GTGCGTTTGA CTCTCTTACG GTGATTGGCG ATAGCCTTAG CGATACCGGA
AATAACGGTC GCTGGACCTG GGATAGTGGT CAAAATAAGC TCTACGACGA ACAGTTGGCC
GAACGATATG GGCTGGCATT AAGCCCTTCC AGCAATGGCG GTTCTAATTA TGCCGCTGGC
GGCGCGACGG CGACCCCGGA ATTAAACCCG CAGGATAATA CCGCGGATCA GGTACGGCAG
TGGCTTGCCA AAACGGGGGG AAAAGCCGAC CACAACGGTT TGTATATTCA CTGGGTCGGC
GGAAACGATC TGGCGGCGGC CATCGCGCGA CCTGCCATGG CACAGCAAAT AGCCGGTAAT
AGCGCCACTA GCGCGGCGGC GCAGGTAGGG CTGTTACTGG ATGCCGGCGC CGGGCTGGTC
GTGGTGCCAA ACGTACCGGA TATTAGTGCG ACGCCAATGC TTCTGGAGGC GGTAATCACC
GCTGGGCTGG GCGCAGCGGC GCCCCCGGCG CTAAAAGCGG CGTTAGATGC GCTGGCGGAG
GGAGCTACGC CCGATTTCGC CAGTCGGCAA CAGGCGATCC GCAAGGCGCT GCTGGCGGCG
GCTGCAACGG TAAGCAGCAA TCCATTTATT CAGCAACTGC TCGTTGAACA ACTGCTGGCG
GGCTATGAAG CGGCGGCAGG GCAGGCGTCA GCTCTGACCG ATTATTATAA TCAGATGGAA
GAGAAGGGGC TGGAGCAACA CGGCGGCAAT ATAGCCCGTG CCGATATCAA CGGCCTCTTT
AAGGAAATTC TTGCCAACCC GCAGGCGTTT GGTCTGACAA ATACCGTAGG TATGGCCTGC
CCGCCGGGCG TATCCGCTTC AGCGTGCTCC TCGGCAATGC CTGGATTTAA TGCGTCGCAG
GACTATCTGT TTGCCGATCA TTTACATCCC GGTCCGCAGG TCCATACCAT TATTGCGCAA
TATATCCAGT CGATCATTGC CGCGCCGGTA CAGGCGACAT ACCTGAACCA AAGCGTTCAG
TCGATGGCGC AAGGCAGTCG TACCACGCTT GACAGCCGTT ATCAGCAGCT TCGCCAGGGG
GAAAACCCTG TTGGTTCGCT GGGCATGTTC GGCGGATACA GCGGGGGATA TCAACGTTAT
GATAATAATG AGGCCGACGG GAACGGTAAT CATAATAATC TGACGGTTGG CGTCGATTAT
CAGCTTAACG AGCAGGTACT GCTGGGAGGG CTGATAGCCG GTTCTCTGGA TAAGCAACAT
CCTGACGATA ATTATCGTTA TGACGCCCGT GGTTTTCAGG CCACCGTATT CAGCCATTTA
CGCGCCGGTC AGGCGTGGCT GGATAGCGAT TTACACTATC TGTCCGCTAA ATTCAGTAAC
ATCCAGCGCA GTATCACGCT CGGTGCGCTA AGACGAGTGG AAGAGGGCGA AACCAACGGG
CAGCTGTGGG GCGCGAGGTT AACCAGTGGT TATGATTTTG TCATGATGCC GTGGTTAACG
ACCGGACCGA TGCTGCAATA TGCATGGGAT TACAGCCACG TTAATGGCTA TAGCGAGAAG
CTCAATACCA GTACATCAAT GCGTTTTGGC GACCAAAACG CCCATTCGCA GGTGGGTGGC
GCTGGCTGGC GTCTGGATCT TCGCCACAGC ATCATTCACT CCTGGGCGCA GATTAATTAT
CGCCGTCAGT TTGGCGATGA TACGTATGTG GCGAACGGCG GCCTTAAATC GACCGCGCTG
ACGTTTAGCC GCGACGGAAA AACGCAGGAT AAAAACTGGG TTGATATCGC GATTGGCGCA
GATTTTCCGC TGTCGGCAAC GGTGTCCGCT TTCGCCGGGC TGTCGCAAAC GGCAGGGTTA
AGCGATGGCA ATCAAACCCG TTATAACGTT GGGTTTAGCG CCCGATTTTG A
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| Protein sequence | MTQKRTLLKY GILSLALAAP LSACAFDSLT VIGDSLSDTG NNGRWTWDSG QNKLYDEQLA
ERYGLALSPS SNGGSNYAAG GATATPELNP QDNTADQVRQ WLAKTGGKAD HNGLYIHWVG
GNDLAAAIAR PAMAQQIAGN SATSAAAQVG LLLDAGAGLV VVPNVPDISA TPMLLEAVIT
AGLGAAAPPA LKAALDALAE GATPDFASRQ QAIRKALLAA AATVSSNPFI QQLLVEQLLA
GYEAAAGQAS ALTDYYNQME EKGLEQHGGN IARADINGLF KEILANPQAF GLTNTVGMAC
PPGVSASACS SAMPGFNASQ DYLFADHLHP GPQVHTIIAQ YIQSIIAAPV QATYLNQSVQ
SMAQGSRTTL DSRYQQLRQG ENPVGSLGMF GGYSGGYQRY DNNEADGNGN HNNLTVGVDY
QLNEQVLLGG LIAGSLDKQH PDDNYRYDAR GFQATVFSHL RAGQAWLDSD LHYLSAKFSN
IQRSITLGAL RRVEEGETNG QLWGARLTSG YDFVMMPWLT TGPMLQYAWD YSHVNGYSEK
LNTSTSMRFG DQNAHSQVGG AGWRLDLRHS IIHSWAQINY RRQFGDDTYV ANGGLKSTAL
TFSRDGKTQD KNWVDIAIGA DFPLSATVSA FAGLSQTAGL SDGNQTRYNV GFSARF
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