Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SNSL254_A0383 |
Symbol | |
ID | 6484690 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
Kingdom | Bacteria |
Replicon accession | NC_011080 |
Strand | + |
Start bp | 391594 |
End bp | 393144 |
Gene Length | 1551 bp |
Protein Length | 516 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642735807 |
Product | hypothetical protein |
Protein accession | YP_002039581 |
Protein GI | 194445311 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4943] Predicted signal transduction protein containing sensor and EAL domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0298247 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 0.0200463 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGTTTA TTGCCGTTCC ACTGATCGTA ATGATATTGG TGGGGTTACT CGCGGGTATC TTCCAGCTAA AACGAGATAT CGCCGTCAGC GCCAATACGC TGCTGCGGTT TAGCGCGGAT ATATCCGCCG CCTCCTGGCA AGTCGCCGGA AAAGCCGCCA GACTGGCTGA GAGTTCCTGC ACTGATACGC TGAAAGAACT GTCCAGAACG CGGGCCTTCA CTCCTTATGT ACGTGACATT GGGTTTCTGG AAAATGGTGA TATCACTTGC TCCTTTGTCA CAGGAACCGA ACGCTATCAT TTTTCCCGGC TGGCAGGGCT TTCCTTACCT GCTTCTTATC CGGAACGGTG GTTGCGATCT ATCGGTAGTA TGGCCGAAGG ACCCGATCGC CTTGTTGTGG TTTATGTGAA AAAAGTAGCA GCGAATAAAG CGGCCTTCGT CATTGTGGAT TCGCAGTATG TCCAGGAGCT CATAGAGATA TTGGCAGCAG AGAGAGCATC AGCCTTTAGC CTGACATTCG GCGCAGGGGA GGCGATTACC AGCGCTGCGA CGTTGCGCGG TAAGGCGTTT TTAACGCAGC GGTTCACCTC AACCGATCAC ACTCTCCAGC TGATGGTGCG AACCCCCTTC TCAACGTTAT CGGCATACTG GTTACAAAAC CTTTTTATTT TTGTTCCGCT GTCATTGTGT CTTTCTGTAG GGATGATGTT GTTCTACAGG CGCTGGTATT TAAAACGTTT ATCTCTGGCC CGGGAGATTG CCAGGGGAAT AACGCACAAT GAGTTTACGG TACATTATCA GCCTGTTTTT AATGTTAAAC ACGGTAGTTG CGGCGGCGTG GAGGCGCTAA TGCGCTGGCC GCAACCGGAT GGCCGTTTTA TAACCCCGGA TATTTTTATT ACCGCCGCAG AAAATGAAGG CATGATTATT CCACTCTCTC GTCATCTGTT CGAACTGATT GCTCATGACG TGATAAACTG GACTGTACCG GATGATTTCT ATATCAGCGT AAATATATCG CCTGCGCATC TTATGGATGA CGGTTTTATA CAAGATATAG AGGCGCTCAG GACTCGTTTG GGAACGATAA CGCTTATGTT GGAGCTCACC GAACGTAGCC TGATTGTAGA ACCTTCACAG GTCGCGGAAA AACTTTCAAC GCTCCGTGAA AAAGGCGTGT TAATAGCGAT TGATGATTTT GGGACCGGCT ATTGCTCCCT CTCCTATCTC CAACAATTAC CTGTAGACTA TCTTAAAATA GACAGAACGT TTATCGATAC CATTGATACC AGCAGCGATG ATGTTCCTGT CCTGGATACT ATCATTACGC TGAGTCAGCG ACTGGGACTC AATGTGGTTG CCGAAGGGGT CAGTACCCAG CACCAATTGC GTTATATCTT AAGCCACGGG GTAGGATTCG TTCAGGGATT TCTTTATGCC AGGCCGATGG AGGCTAATGA CTTTATGAGC TGGCTTGGCA AGTCGGCCCA GAGGCAAAAT GGTCTGCTCA AGGGGGAAAA CGAATCTGCG AGTGGCCTGG TGGCTGAATA A
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Protein sequence | MLFIAVPLIV MILVGLLAGI FQLKRDIAVS ANTLLRFSAD ISAASWQVAG KAARLAESSC TDTLKELSRT RAFTPYVRDI GFLENGDITC SFVTGTERYH FSRLAGLSLP ASYPERWLRS IGSMAEGPDR LVVVYVKKVA ANKAAFVIVD SQYVQELIEI LAAERASAFS LTFGAGEAIT SAATLRGKAF LTQRFTSTDH TLQLMVRTPF STLSAYWLQN LFIFVPLSLC LSVGMMLFYR RWYLKRLSLA REIARGITHN EFTVHYQPVF NVKHGSCGGV EALMRWPQPD GRFITPDIFI TAAENEGMII PLSRHLFELI AHDVINWTVP DDFYISVNIS PAHLMDDGFI QDIEALRTRL GTITLMLELT ERSLIVEPSQ VAEKLSTLRE KGVLIAIDDF GTGYCSLSYL QQLPVDYLKI DRTFIDTIDT SSDDVPVLDT IITLSQRLGL NVVAEGVSTQ HQLRYILSHG VGFVQGFLYA RPMEANDFMS WLGKSAQRQN GLLKGENESA SGLVAE
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