| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_A0029 |
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| Symbol | |
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| ID | 6485310 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011080 |
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| Strand | + |
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| Start bp | 30471 |
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| End bp | 31202 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642735474 |
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| Product | fimbrial chaperone |
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| Protein accession | YP_002039256 |
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| Protein GI | 194444078 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.91937 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 58 |
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| Fosmid unclonability p-value | 0.181183 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTCCGC AACCTTCATT CTTGCCTATG AATAAGTTCT TTTTACGCTG CGCGATATAT
TGGTGCTTGC TTCCCATATC ATGGGCGCAG GCTGGCGTGG TAATTGGCGG TACTCGCTTT
ATCTATCATG CGGGCGCCCC GGCATTAAGC GTACCGGTAA GTAACCATTC AGAAGCGTCC
TGGTTAATTG ATACGCATAT TGTACCTGGA GGCCGCTGGC CAGGAACCAA AAACGAAGGG
AATATCACGC CCTTCGTGGT CACGCCGCCA TTATTTATGC TTTCAGCGCG CCAGGAAAAT
TCAATGCGGG TGGTTTATAC CGGCGGACCG CTACCCGCCG ACAGGGAAAG TCTGTTTACC
TTGAGTATCG CCGCTATTCC CTCCGGTAAA CCGGAAGCGA ACCGTGTACA AATGGCGTTT
CGTTCGGCTT TAAAATTGCT CTATCGCCCT GAGGGACTCG CCGGCAATCC GCAGCAGGCC
TACCGGCATC TGATCTGGTC GCTTACCCCC GATGGCGCGA CGGTACGCAA TCCTACACCC
TATTACGTTA CGCTCTTTTT ATTACGTGCT AACGAGCGCG CCCAGGACAA CGCCGGGGTC
GTGGCTCCCT TTGCAACGCG TCAAACGGAT TGGTGCCGGC ACACGGTTCG CTGCACTGTG
CGCTGGCAAA GTATTAATGA CTATGGGCGG GTAATGCCAG CGCAAACCGT GGATCTGACG
CGTATTCATT AA
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| Protein sequence | MPPQPSFLPM NKFFLRCAIY WCLLPISWAQ AGVVIGGTRF IYHAGAPALS VPVSNHSEAS
WLIDTHIVPG GRWPGTKNEG NITPFVVTPP LFMLSARQEN SMRVVYTGGP LPADRESLFT
LSIAAIPSGK PEANRVQMAF RSALKLLYRP EGLAGNPQQA YRHLIWSLTP DGATVRNPTP
YYVTLFLLRA NERAQDNAGV VAPFATRQTD WCRHTVRCTV RWQSINDYGR VMPAQTVDLT
RIH
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