Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP2232 |
Symbol | |
ID | 3242541 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | - |
Start bp | 2262635 |
End bp | 2263774 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 637168915 |
Product | major facilitator superfamily protein |
Protein accession | YP_189785 |
Protein GI | 57865639 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.165847 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAA TATGGATTTT AACTATAGGT ATGTTTGCCT TAGGTATGGA TGCTTATATA GTAGCAGGAT TAATACCTTC AATAAGTAAA AGTTTTAATA AAAGTAGCTC TGCTATTGGG CAAGGAGTAA CAGTTTTTAC ATTGTTTTTC TCTATCTCTG CCCCCATTTT TTCAACAATA TTAGCTAAAT CCCCAGTTAA AAAAATACTA ATAATAGCAT TCAGTATATT TACTTTAGCC AATATTATAA CCGCAATATC TATGAACTAC ATGCTATATA TCGTATCAAG AGCAATCGCT GGTTTAGGAG CTGGCGTATC CTCACCAATT GCAATAAGTG CAAGCAATCA TTTAGTCTCC GAAAAGCATA AAGGAAAAGC AATCGCTTTT ACAGTAGGCG GAATGAGTGT AGGAACTGTT ATAGGAGTTC CTCTCGGACT AGAAATTGCC AACATTTCTA ATTGGCGATT TGCAATGTTG GTTATTATTG TCATTAGTTT TATTGCATTA ATAAGCATAT CTATATTGAT GCCTAAATTT AAAATAGAAG CTCCTCCAAA TTTAAAAGAT CGTTTTCAAT TATTTTTAAA CAAGCATGTA CTAAGAGTTA TTTCGGTTAC ATTATGCGCT GCCATTGCTA GTTTAGGTTT GTATACTTAT TTAGCCGATA TTATTAAAAC AAATACAGAT ACAAAAAATT TAACTCATTA CCTTACAGCG TGGGGAATAG GCGGATTAAT AGGAAGTTTT GGTATAGGAT TTATTATAGA TAGATTTAAA AATACAAGAT TTGTTATGCT AATTATTTTA ATTTTACTAG CATTAAGTTT TGGTTTAATT CCTATTTCTA TTAACTTGCC TATATTAGGT TTAATTCCCT TTATTTTATG GGGAGCTATG GGATGGGCTA CACAAGCTCC TCAACAACAT ATATTATTGA AAAAACATCC TGAATATGGA GGCTCTGCTG TCGCTTTAAA TAGTTCTATT AATTATTTAG GCAGTGCTAT GGGATCAGCA ATCGGAGGAA TTATTTTATT TAATGCTAAT AGTACAAATG TACTAATATA TAGTGCTTTA GGAATTACTA TTATTGGTAT TTTATTACAA TTACTAAATT TATCCCTAGA AAAAAATTAA
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Protein sequence | MKKIWILTIG MFALGMDAYI VAGLIPSISK SFNKSSSAIG QGVTVFTLFF SISAPIFSTI LAKSPVKKIL IIAFSIFTLA NIITAISMNY MLYIVSRAIA GLGAGVSSPI AISASNHLVS EKHKGKAIAF TVGGMSVGTV IGVPLGLEIA NISNWRFAML VIIVISFIAL ISISILMPKF KIEAPPNLKD RFQLFLNKHV LRVISVTLCA AIASLGLYTY LADIIKTNTD TKNLTHYLTA WGIGGLIGSF GIGFIIDRFK NTRFVMLIIL ILLALSFGLI PISINLPILG LIPFILWGAM GWATQAPQQH ILLKKHPEYG GSAVALNSSI NYLGSAMGSA IGGIILFNAN STNVLIYSAL GITIIGILLQ LLNLSLEKN
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