Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP1948 |
Symbol | tcaA |
ID | 3242455 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | - |
Start bp | 1962990 |
End bp | 1964378 |
Gene Length | 1389 bp |
Protein Length | 462 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 637168636 |
Product | tcaA protein |
Protein accession | YP_189506 |
Protein GI | 57865384 |
COG category | [S] Function unknown |
COG ID | [COG4640] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTCAAT GCCCAAATTG TGGTCATCAA GTGAAAGATG ATACATCGCA ATGTCCAAAC TGTGGGCAAC TATTAACTAA GAAGAAAAAA AGAAAGATTA AAGACCAATC ATCTCAATCG AGTAATGAGA ATTCTACCAA TATACGTCTT CGTAAAATTG TGCCGATAGG TATTAGTGTA TTTATCTTAA TACTTATTAT CGTGTTATTT TTCCTTTTAA GAAATTATAA TTCGCCTAAT GCACAAGCTA AGATATTAGT TAATGCTGTA GATAATAATG ATTCACAAAA AGTTGCTACA TTATTGAGTA CTAAAAATAA AAAAGTAGAC GATGTTGAAG CGCAACAATA TATTAATTAT GTAAAAAAAG AAGTAGGTAT TAAGAAGTAT ATTCGAGATA TCAATAATAC TGTAGATAAA TTGAATAAAA GTAATTCAAG CGTGGCATCT TATATACAAA CGAAAAGTGG ACAAGATGTA CTTAAGATAA GTAAAAATGG TACAAAGTAT TTAATTTTTG ATAATATGAG TTTCACAGCT CCGACTAAAA AGCCAATTAT TAAACCTAAA GTAGAAACTA AATATGAATT TAGAACAAGT GGTAAAAAGA AAACTGTCAT TGCTGAAGCA AATAAAAATA CACCTTTGGG TGAATTTATT CCTGGTACAT ATCATTTACC AGCTAAGAAA ATTACAGAAA ACGGTACATT CAATGGGCAT TTAAATTTTG ACTTTAGAGA AAGCCACTCT GAAACCGTAG ATGTAGCTGA AGATTATGAT CAATCATTTA TCAATATCAA ATTTAAGGGT GCGAATAAAT TAAGTGATAA ATCAGAAAAA GTTCAAATCA ATGACCGTAC ATTCACTTAT TCTCATTCTA AAGAATTTGG TCCTTATCCA AAAACAAAAG ATATAACGAT TTCTGCAACT GGTAAGGCAA AAGGTAAGAC GTTTAGTTCT GAGACGAAAA CAATTAGTGC AGACGATTTG AAAGATAATA CGAAAGTTAC ATTGGAATTT GATAGTGATA AAATAAATAG CTATGTTGAG AAGAAAGAAA AAGAAGAAAA TAGTTTGAAA AATAAATTAA CTGAATTTTT TACTGGTTAT GCAACGGCTA TGAATTCAGC ATTTAATATG AATGATTTTA ACTTTATATC GAGTTATTTT AAAAAGAATT CGTCTATATA CACATCAATG AAAAGTAATT TCCAAAATCG AACGAACGTG ACTATGATAT CTCCGCAAGT GTTAAGTGTT CATCGAAACG GACATACTGT AAGAACAACT ATTCAACATA TCGATCATAT TGGTAATTAT ATAAATAAAG ATTATGAATT AGAAATAGAT AATGATGATA GTAATATGCA GTTGGTTAAA GAATTATAA
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Protein sequence | MSQCPNCGHQ VKDDTSQCPN CGQLLTKKKK RKIKDQSSQS SNENSTNIRL RKIVPIGISV FILILIIVLF FLLRNYNSPN AQAKILVNAV DNNDSQKVAT LLSTKNKKVD DVEAQQYINY VKKEVGIKKY IRDINNTVDK LNKSNSSVAS YIQTKSGQDV LKISKNGTKY LIFDNMSFTA PTKKPIIKPK VETKYEFRTS GKKKTVIAEA NKNTPLGEFI PGTYHLPAKK ITENGTFNGH LNFDFRESHS ETVDVAEDYD QSFINIKFKG ANKLSDKSEK VQINDRTFTY SHSKEFGPYP KTKDITISAT GKAKGKTFSS ETKTISADDL KDNTKVTLEF DSDKINSYVE KKEKEENSLK NKLTEFFTGY ATAMNSAFNM NDFNFISSYF KKNSSIYTSM KSNFQNRTNV TMISPQVLSV HRNGHTVRTT IQHIDHIGNY INKDYELEID NDDSNMQLVK EL
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