| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP1759 |
|---|
| Symbol | |
|---|
| ID | 3242148 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus epidermidis RP62A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002976 |
|---|
| Strand | - |
|---|
| Start bp | 1795685 |
|---|
| End bp | 1796554 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 637168444 |
|---|
| Product | HAD-superfamily cof-like hydrolase |
|---|
| Protein accession | YP_189323 |
|---|
| Protein GI | 57867658 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
|---|
| TIGRFAM ID | [TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGGATA ATATGAAAAA TATAAAAGCA ATTTTTTTAG ATATGGATGG AACGATTTTA
CATGAAAATA ATAAAGCCTC GGAATATACT AAACAAGTGA TTAATGAATT GAGAGAGCAA
AATTATAAAG TTTTCCTTGC TACTGGGAGA TCTTATTCAG AAATCAGTCA GCTTGTTCCT
GATGGATTCA CTGTAGATGG TATTATCAGT TCGAATGGAA CTTCAGGTGA AATTCATGGA
GATAATTTGT TTAGACATAG TTTAACTTTA GAACGAGTAC AGAAAATTGT GGAATTGGCT
AAAAAACAAC ATATTTATTA TGAAGTTTTT CCTTTTGAAA GTAATCGTAT ATCTCTTAAA
GAAGATGAAG ATTGGATGAA AGAAATGATT TCCACTATAG AGCCACCTGA CGCTGTAAGT
CAAAGTGAGT GGTCATCGCG AAGAGAGGCA ATTAAAGGAA AAATAGATTG GCGAGATACC
TTACCTGATG CACACTTTTC TAAAATATAT TTATTTAGTC CCAACTTAGA TAAAATAACT
GATTTTCGCA ACCAGCTTGT TGAAAACCAA TCAAATTTAG GTATTACCGT ATCTAATTCT
TCGCGTTATA ATGCTGAAAC GATGCCATAT CATACAGATA AGGGTACAGG TATCAAGGAA
ATGATTGATC ACTATGGTAT TAAGCAAGAA GAAACTTTAG TTATTGGTGA TAGTGATAAT
GATAGAGCTA TGTTTAATTT TGGCCATCAC ACTGTTGCAA TGAAAAATGC AAGACAAGAA
ATTAAAAATC TTACAGATGA TATTACCGAA TACACGAACG AAGAAGATGG TGCAGCACAT
TACTTAAAAA GTCATTTATT AGATAACTAG
|
|---|
| Protein sequence | MEDNMKNIKA IFLDMDGTIL HENNKASEYT KQVINELREQ NYKVFLATGR SYSEISQLVP
DGFTVDGIIS SNGTSGEIHG DNLFRHSLTL ERVQKIVELA KKQHIYYEVF PFESNRISLK
EDEDWMKEMI STIEPPDAVS QSEWSSRREA IKGKIDWRDT LPDAHFSKIY LFSPNLDKIT
DFRNQLVENQ SNLGITVSNS SRYNAETMPY HTDKGTGIKE MIDHYGIKQE ETLVIGDSDN
DRAMFNFGHH TVAMKNARQE IKNLTDDITE YTNEEDGAAH YLKSHLLDN
|
|---|
| |