| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP1498 |
|---|
| Symbol | |
|---|
| ID | 3241187 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus epidermidis RP62A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002976 |
|---|
| Strand | - |
|---|
| Start bp | 1564992 |
|---|
| End bp | 1566242 |
|---|
| Gene Length | 1251 bp |
|---|
| Protein Length | 416 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 637168180 |
|---|
| Product | ammonium transporter family protein |
|---|
| Protein accession | YP_189064 |
|---|
| Protein GI | 57867383 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0004] Ammonia permease |
|---|
| TIGRFAM ID | [TIGR00836] ammonium transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.943229 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATATGA ATGATACAAT ATTTCTATTT TTATGTACTC TATTAGTATG GTTAATGACA
CCAGGTTTGA GCCTTTTTTA TGGGGGACTC GTACAATCAA AAAATGCTTT AAATACTGTA
ATGCAAAGTA TGGTTGCCAT TGTCATTGTC ACATTTATAT GGATAATGAT TGGTTTCTCT
TTAAGTTTTG ATGGAGGTAA TCAATGGATA GGTGGTTTGA AATTTTTGGG TCTTCATCAT
GTTGGTTTTG AAACTTCAAA AACTTTGAGT CCTCATATAC CTCTCTCATT ATTTATGTTG
TTTCAAATGA TGTTTTGTAC AATTGCGGTA TCTATTTTAT CAGGTTCGAT AGCCGAGAAA
ATGAGATTCA TTCCTTATCT GATTTTTGTG AGTTTATGGG TTCTATTAAT TTATAGCCCT
GTTGCCCACT GGGTATGGGG TGGTGGTTGG ATTAGTAAAA TTGGAGCAAT AGATTATGCG
GGTGGAACAG TAGTTCATAT AACATCAGGT GTATCTGGTT TGGTTCTTGG GATAATGATA
GGTATAGGTA AAAAGAAAGA AAAACATACT CCCCATAATC TATTAATTAC ACTTATAGGT
GGTATATTAG TATGGTTAGG ATGGTATGGA TTTAATGTGG GCAGTGCATT TACATTCGAT
CACATAGCCA TGATATCGTT TGTAAATACA GTTATTGGTG CAAGTGCAGG TGCTTTCGGT
TGGTTAATCT TTGAATATAT CTTGAAAAAG ACTACAAGTT TACTAGGTCT TTTATCTGGA
GCGCTCTCTG GTCTTGTCGC TATTACACCA GCAGCAGGAT ACGTCAGCTA TATGAGTGCC
ATGATTATTG CAATAATGGG TGGCATAGGT TGCTATATCG TTATAAATTT AATTAAAGTA
AAACTCCAAT ATAATGATGC ACTAGATGCA TTTGGTATTC ATGGTGTAGG TGGTATCTTA
GGAGCTGTGT TTACAGGAGT TTTTCAATCA CATCAAATTA ATAGTGCGGT GGAGAATGGT
TTTATCTATA CAGGTGATTT TAAAATAGTA GGGATTCAAC TTGGAGCGGC AATTGCGACT
GTCGTTTTTA GCGCAATAGT CACTTTTTTG ATTGCTAGAT TTATTAAAAT TTTTACTCCT
TTAGCTACAA CTCAAGAAGA AGATAAAACA GGACTCGATG TTATAGTACA CGGTGAGAAA
GCGTATTTCT ATGGAGAGCT AAATAAGTTT AATCGTCATA TTAAGTTTTA A
|
|---|
| Protein sequence | MNMNDTIFLF LCTLLVWLMT PGLSLFYGGL VQSKNALNTV MQSMVAIVIV TFIWIMIGFS
LSFDGGNQWI GGLKFLGLHH VGFETSKTLS PHIPLSLFML FQMMFCTIAV SILSGSIAEK
MRFIPYLIFV SLWVLLIYSP VAHWVWGGGW ISKIGAIDYA GGTVVHITSG VSGLVLGIMI
GIGKKKEKHT PHNLLITLIG GILVWLGWYG FNVGSAFTFD HIAMISFVNT VIGASAGAFG
WLIFEYILKK TTSLLGLLSG ALSGLVAITP AAGYVSYMSA MIIAIMGGIG CYIVINLIKV
KLQYNDALDA FGIHGVGGIL GAVFTGVFQS HQINSAVENG FIYTGDFKIV GIQLGAAIAT
VVFSAIVTFL IARFIKIFTP LATTQEEDKT GLDVIVHGEK AYFYGELNKF NRHIKF
|
|---|
| |