Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP1493 |
Symbol | agrA |
ID | 3241182 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | + |
Start bp | 1560467 |
End bp | 1561138 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 637168175 |
Product | accessory gene regulator protein A |
Protein accession | YP_189059 |
Protein GI | 57867378 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3279] Response regulator of the LytR/AlgR family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.760639 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTATCAA TCATTAAAAA CTACATAATG ATTGAAGAAA AGCCAATGGA GTTAGCTTTA GCAACAAATG ATCCTTATGA GGTCTTAGAG CAATCAAAAG AACTTAATGA CATTGGTTGT TACTTCCTTG ATATTCAATT AGAAGCTGAT ATGAACGGTA TTAAATTAGC CAGTGAAATT CGTAAACATG ATCCTGTTGG TAATATTATA TTTGTAACCA GTCACAGTGA GCTGACTTAT TTGACGTTTG TTTATAAAGT GGCTGCTATG GATTTTATTT TTAAAGATGA TCCATCTGAA TTAAAAATGA GAATCATAGA TTGTCTTGAA ACAGCACATA CACGACTCAA ATTATTATCA AAAGAAAGTA ATGTAGATAC GATTGAGTTA AAGCGGGGAA GTAATTCAGT ATACGTTCAA TATGATGATA TTATGTTTTT TGAATCATCT ACGAAATCTC ATAGACTCAT TGCACATCTT GATAATCGAC AAATTGAATT TTATGGAAAT TTAAAGGAAT TAGCACAGCT TGATGAACGT TTCTTTAGAT GTCATAACAG TTTTGTAATA AACAGGCATA ATATTGAATC TATTGACTCA AAAGAACGTA TTGTTTACTT TAAGAATGGC GAAAATTGTT TCGCTTCAGT ACGTAATGTT AAAAAAATAT AA
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Protein sequence | MVSIIKNYIM IEEKPMELAL ATNDPYEVLE QSKELNDIGC YFLDIQLEAD MNGIKLASEI RKHDPVGNII FVTSHSELTY LTFVYKVAAM DFIFKDDPSE LKMRIIDCLE TAHTRLKLLS KESNVDTIEL KRGSNSVYVQ YDDIMFFESS TKSHRLIAHL DNRQIEFYGN LKELAQLDER FFRCHNSFVI NRHNIESIDS KERIVYFKNG ENCFASVRNV KKI
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