Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP1324 |
Symbol | putA |
ID | 3241711 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | + |
Start bp | 1385177 |
End bp | 1386178 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 637167973 |
Product | proline dehydrogenase |
Protein accession | YP_188896 |
Protein GI | 57867214 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0506] Proline dehydrogenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.26467 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCTTAT TTAAAGATTT TTTCATTGCG TTATCTAATC ATACATATCT TAATAAAATA GCTAAAAAGA TGGGACCTCA AATGGGAGCA AATCGTGTAG TCGCAGGAAA TACGATTCAT CAATTAATTG AGACTATACA ATATTTAAAT GATTATAATA TTTCAGTTAC TGTCGACTCA TTGGGTGAAT TTGTTAATAC TAGAGAAGAA AGCATTAAAG CTAAAGAAGA GATTTTAGAA ATTATCGATG CAATATATAG CAATAATGTT AAGGCACATA TGTCAGTCAA GATAAGTCAA CTTGGAAGTG AGTTTGATTT AAATCTTGCT TATGAAAACA TGAGAGAAAT TTTACTTAAA GCTGATAAGA ATGGGAAGAT GCATATTAAT ATTGATACAG AGAAGTACGA TAGTCTTTCT AAAATTCAAC ATATTATTGA TAGATTGAAA GGTGAATTTA AAAATGTGGG TACAGTCGTT CAAGCCTATC TGTATGAAGC CGATGATATA ATTGATAAAT ATCCTGAATT ACGTTTGAGA CTTGTGAAAG GTGCTTATAA GGAAGATGCG TCAATCGCTT TTCAATCAAA AGAAGAAATT GACGCAAATT ATATTAGAAT TATAAAAAAA CGACTACTAA ATTCAAAGAA CTTTACATCG GTGGCTACCC ATGACAATGA AATAATCAAC CAAGTCAAAC AATTTATGAA AGAAAATCAT ATCAGCAAAG ATAAAATGGA ATTTCAAATG TTGTACGGTT TCCGCACGGA ATTAGCACAA AAAATAGCTA ATGAAGGTTA TTTTTTTACA GTTTATGTAC CATACGGTAA TGATTGGTTT GCGTACTTTA TGAGAAGACT AGCAGAACGG CCTCAAAACT TGTCATTAGC TATAAAAGAA TTTACTAAAC CCAAAATCTT AAAAAAGGTA ACCTTGGGTA TAGGTATATT TGCAACTTTA TTGACGTCTC TTATTCTTGG CATTAAAAGA CATAAAAAAT AA
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Protein sequence | MSLFKDFFIA LSNHTYLNKI AKKMGPQMGA NRVVAGNTIH QLIETIQYLN DYNISVTVDS LGEFVNTREE SIKAKEEILE IIDAIYSNNV KAHMSVKISQ LGSEFDLNLA YENMREILLK ADKNGKMHIN IDTEKYDSLS KIQHIIDRLK GEFKNVGTVV QAYLYEADDI IDKYPELRLR LVKGAYKEDA SIAFQSKEEI DANYIRIIKK RLLNSKNFTS VATHDNEIIN QVKQFMKENH ISKDKMEFQM LYGFRTELAQ KIANEGYFFT VYVPYGNDWF AYFMRRLAER PQNLSLAIKE FTKPKILKKV TLGIGIFATL LTSLILGIKR HKK
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