Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP1150 |
Symbol | hrcA |
ID | 3240942 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | - |
Start bp | 1187022 |
End bp | 1187999 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 637167803 |
Product | heat-inducible transcription repressor HrcA |
Protein accession | YP_188726 |
Protein GI | 57867039 |
COG category | [K] Transcription |
COG ID | [COG1420] Transcriptional regulator of heat shock gene |
TIGRFAM ID | [TIGR00331] heat shock gene repressor HrcA |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTACAA AAAGACAATT AAGCATCCTT AATGCTATTG TTGAAGATTA TGTTGATTTT GGACAACCGA TTGGATCTAA AACTCTAATT CATCGTCATC ACTTGGATGT GAGTCCAGCT ACCATTAGAA ATGAAATGAA GCAACTTGAA GAAATGCATT TCATTGAGAA GACACACACA TCTTCTGGAA GGGTGCCATC TGAATCAGGG ATTAGATATT ATGTCAATCG CCTTTTAGAA CAAACATCTC ATCAAAGTCA AAACAAAATT CAACGTTTAA ATCAATTATT AATTGAGAAT CATTATGATA GTTCGACTGC ACTCACAAAC TTTGCACACG AATTATCTAT GAAATCTCAA TATGCAACGT TGGTAGTCCG CCCTAATCAT AAACAAGATG TTATAAATGA TATACATCTT ATTCGTGCTA ACAACCATTT GATTATTTTA GTAATGGTAT TTTCCTCTGG ACATGTTGAA AATATACATT TTGTATCACA TGCTCAACTA AATAATATTA ATTTAAATAA AATAGCAAAC TTTTTGACCG AACATTTCAG TTTTAATCGT AAAGTACTAA CTCAAAACAT TGAGTCTTAC TTTAGTCAAA AAGAAGAGCT ATTACTTGCA AATGAAGTAG TTGAGATGAT AAATTTACAA ATTGGTAATC AAAGTAATAG CATTTATATG GGTGGAAAGG TTAAACTTAT TGATGCGTTA AATGAGTCCA ACGTTTCATC TATTCAACCG ATTCTTCAAT ATATAGAATC AAATAAAATA ACTGAATTAT TAGAAGATAT ATCAACATCT CAAATCAATG TCCGAATTGG TAAAGAGATT GATGATAGTT TAAGCGATAT ATCAATTGTG ACTAGTCAGT ATCATTTTGA TGAGTCACTA AAAGGTCAAA TTGCAGTAAT CGGACCAACT GCAATGCATT ATCAAAATGT AATTCAATTA TTAAACCGTA TATGGTAG
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Protein sequence | MITKRQLSIL NAIVEDYVDF GQPIGSKTLI HRHHLDVSPA TIRNEMKQLE EMHFIEKTHT SSGRVPSESG IRYYVNRLLE QTSHQSQNKI QRLNQLLIEN HYDSSTALTN FAHELSMKSQ YATLVVRPNH KQDVINDIHL IRANNHLIIL VMVFSSGHVE NIHFVSHAQL NNINLNKIAN FLTEHFSFNR KVLTQNIESY FSQKEELLLA NEVVEMINLQ IGNQSNSIYM GGKVKLIDAL NESNVSSIQP ILQYIESNKI TELLEDISTS QINVRIGKEI DDSLSDISIV TSQYHFDESL KGQIAVIGPT AMHYQNVIQL LNRIW
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