Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP1064 |
Symbol | |
ID | 3240711 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | - |
Start bp | 1108484 |
End bp | 1109242 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 637167718 |
Product | short chain dehydrogenase/reductase family oxidoreductase |
Protein accession | YP_188641 |
Protein GI | 57866976 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.630336 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATAGGCA AACACTTTAT TATAACTGGA GCAACGAGTG GGTTAGGTTT TGCAATAACC AATGAATTAC TTCAAAGAGG GGCCCATGTT ACTATACTTG CAAGAAATAT AGATAAGTTC AATCGAATCA AAGAAAACTA TTTTAAACCT GAACATATCA ATGTGATTAA ATGTGATTTA ATGCAACGAA AAGATATTGA ATCATTACAA AAATTTTTAA ATACACCTAT AAATGGTTTC ATCTACAGTT CAGGTGTTGG ATATTTTAAG TCTATAAGTG AGCATTCAAC TCGTGAAGTA GTAGAAACTT ACGAGGTTAA TCTTACAAAT TTTAATTTGT TATACAAAGT GATTCAACCA CAATTAGTAA AAGCAGCATA TATCGTTGGT ATATCTAGTC AAGCTGCTCT TGTTTCACAG GCTAATGCGG CACATTACGG TGCATCGAAA GCAGGGTTTA GCGCCGTTCT TAATGCATTG AGATTAGAAC AACCGGAATT AAAAGTGCTC AATGTACAGC CCGGTCCAAT AGATACACCA TTCCAAAAAA ACGCAGATCC TACTCTAAAG TATTTTAAAA ATTATAGACA CATGATGATA CAACCTCAAC AACTTGCCAA GCAAATAGTG GAAGGAATAA TACTAAATAA AATTGAAATT AATCAACCAT CATGGATGCA AATAATGCTT AAATTTTATC AATTATGTCC ACGTACACTA GAAAAATTAT GTCCAAATCT ATTTAAAAAT AAAGTTTAA
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Protein sequence | MIGKHFIITG ATSGLGFAIT NELLQRGAHV TILARNIDKF NRIKENYFKP EHINVIKCDL MQRKDIESLQ KFLNTPINGF IYSSGVGYFK SISEHSTREV VETYEVNLTN FNLLYKVIQP QLVKAAYIVG ISSQAALVSQ ANAAHYGASK AGFSAVLNAL RLEQPELKVL NVQPGPIDTP FQKNADPTLK YFKNYRHMMI QPQQLAKQIV EGIILNKIEI NQPSWMQIML KFYQLCPRTL EKLCPNLFKN KV
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