Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP1058 |
Symbol | scpA |
ID | 3240697 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | - |
Start bp | 1103838 |
End bp | 1104569 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 637167712 |
Product | segregation and condensation protein A |
Protein accession | YP_188635 |
Protein GI | 57866962 |
COG category | [S] Function unknown |
COG ID | [COG1354] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATGAAG TAAAACTCGA TGCATTTAAT GGTCCATTAG ACTTATTATT GCATCTAATT CAAAAATATG AAATTGATAT TTATGATATC CCTATGAAAG CCTTAACTGA ACAGTACATG CAATATGTTC ATGCGATGAA TCAGCTAGAA ATTAATGTTG CTAGTGAATA TTTAGTTATG GCATCAGAAT TACTAATGAT TAAAAGTAAA TTACTATTGC CTCAAACGAG CATCGAAGAA GATATAGAAG AGGATCCTCG TGAGGATTTA GTAGGAAGAC TTATTGAGTA TCAAAACTAT AAAGAATATA CTGAAATATT AAATACTATG AAAGAAGAAC GCGATCTTTA TTTTACTAAA CATCCGACGG ACCTTACTCA TTTAGAGACA AATGAATCGT GGGATCCTAA TCAAACGATT GATTTAACTG AATTGATTGT AGCTTATCAA AGAGTAAAAA ATCGAGTTGA ACTTAACACT CCTAAATCTG TAGAAATTAA AAAAGAAACC TTTACGATTC AACAAGCTAC AGCACAGGTT ACCGAACGAT TAAAACAACA TGAATCGTTT AACTTTTTCA GTTTATTTAC ATTTCATGAA CCGGTCGAAC AAGTTGTTAC TCATTTTTTG GCAATTTTAG AAATGTCAAA ATCAGGAATA GTTAATATCA AACAAACTAA ACAATTTGAT GACATTGACA TAATTAGAGG AGTGAACTAT AGCATTGGAT AA
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Protein sequence | MYEVKLDAFN GPLDLLLHLI QKYEIDIYDI PMKALTEQYM QYVHAMNQLE INVASEYLVM ASELLMIKSK LLLPQTSIEE DIEEDPREDL VGRLIEYQNY KEYTEILNTM KEERDLYFTK HPTDLTHLET NESWDPNQTI DLTELIVAYQ RVKNRVELNT PKSVEIKKET FTIQQATAQV TERLKQHESF NFFSLFTFHE PVEQVVTHFL AILEMSKSGI VNIKQTKQFD DIDIIRGVNY SIG
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