Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP1049 |
Symbol | recQ-2 |
ID | 3240680 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | - |
Start bp | 1095743 |
End bp | 1097122 |
Gene Length | 1380 bp |
Protein Length | 459 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 637167703 |
Product | ATP-dependent DNA helicase RecQ |
Protein accession | YP_188626 |
Protein GI | 57866945 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0514] Superfamily II DNA helicase |
TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.397749 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCTGAAAG ATAATTTAAA GGAATGGTTT GGTTTTGATG AATTTAAAGA GGGGCAAGAA GAAATTATTG ATAGTGTCCT TCATGGAAGG CATACACTTG GAATTTTACC AACTGGTAGC GGTAAAAGCT TATGTTATCA ACTCCCTACA TATATATTAG AAAAACCGAC ATTAATTATA TCACCACTCA TTTCGCTTAT GGATGATCAA GTTATGCAAA TGAAGTTAAA AGGTGAAACA CATGTTGCAT GTGTACATTC CGGCATGGAC GAAGTAGAAA AAAGAGACAA TATTAAACGA CTAAGTAAAA GTCGATTTAT TTATTTAAGT CCAGAATATA TACTGCAACC TCATAATTTT AAGTACATCG CTCATATCAA CTTTGGATTA ATAGTATTAG ATGAAGCGCA CTGTTTATCA GAGTGGGGGT ATGATTTTAG ACCTCACTAT GCTTTAGTTG GTAAAATTAT TCATCATTTT AATTCAGCAA CAGTGTTAGC ACTAACAGCT ACAGCACCAC CTCAATTAGA AACTGATTTA TCTCACATTT TATCACTCAA ATTAAATGTA GTTCAAAAAA GTATGAATCG AGAAAATATT AGCTTACAAC ACTATAATTT TAATGATGAT GAGGGGAAGA TTGAATGGCT GTTACCATTT TTATCTAATT CTGGGCCTAC AATTATATAT GTTTCTTCTA AAAAAAGATG TTTAGAACTA GCTCAAATGA TTTATGACTC AGGATATCTA ACAGGTATAT ATCATGGAGA TTTAAGTTAT CAGGAACGCC AAACAGTTCA ACAACAGTTT TTTAATAATG ACATCCCCGT TATAGTAGCA ACAAGTGCTT TTGGAATGGG AATAAATAAA AAAGATATTC GTACAGTCAT ACATTTTCAT TTATCATCTT CACCATCTAA CTATTTACAA GAAATTGGTC GTGCTGGTAG GGATGGTAAA CAAAGTCAAG CCATTAGTTT ATTTCAACCT GATGATAGTT TTATTCTAGA AACACTACTA TTCACTGATA TTATCACAGA TGACGATATT ACAATGTTTG AGACGGGAAA CCACTTACCA GATGAAAAGG AAAAAATTTT AAGTACTTTA AATATACAAT TCACATTTAG CCAACTTAAA GATATATTTC ATCAATCATA TCAACGTAAG CGACTAGGTT ATATGAGAAT GATGGGCTAT ACTAATTTAG ATCAATGTCG ACGTAAATAC TTACTAGAAT TTTTTGGCGA ACATCCTCAA AGTCCAAAAC AATGTTGTGA TCAAGATTCA AGATTAGAGC CTATTCAGAT ATTGAATCGT AAAAAGGTGA AAAGAAAACT AAGTTTTAAT GAAAAATTAT ATAATTTGTT CGAAACCTAG
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Protein sequence | MLKDNLKEWF GFDEFKEGQE EIIDSVLHGR HTLGILPTGS GKSLCYQLPT YILEKPTLII SPLISLMDDQ VMQMKLKGET HVACVHSGMD EVEKRDNIKR LSKSRFIYLS PEYILQPHNF KYIAHINFGL IVLDEAHCLS EWGYDFRPHY ALVGKIIHHF NSATVLALTA TAPPQLETDL SHILSLKLNV VQKSMNRENI SLQHYNFNDD EGKIEWLLPF LSNSGPTIIY VSSKKRCLEL AQMIYDSGYL TGIYHGDLSY QERQTVQQQF FNNDIPVIVA TSAFGMGINK KDIRTVIHFH LSSSPSNYLQ EIGRAGRDGK QSQAISLFQP DDSFILETLL FTDIITDDDI TMFETGNHLP DEKEKILSTL NIQFTFSQLK DIFHQSYQRK RLGYMRMMGY TNLDQCRRKY LLEFFGEHPQ SPKQCCDQDS RLEPIQILNR KKVKRKLSFN EKLYNLFET
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