Gene SERP1030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP1030 
Symbol 
ID3240703 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand
Start bp1075993 
End bp1076688 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content36% 
IMG OID637167684 
Producthypothetical protein 
Protein accessionYP_188607 
Protein GI57866968 
COG category[R] General function prediction only 
COG ID[COG2738] Predicted Zn-dependent protease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.42306 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTTAA TATCAATGAT TATATATTTC GTAATATTAA TGGTCATTCC AATGTGGGCT 
CAACACAAAG TTAAATCTAA TTATGAAAAA TACTCACAAG TGAGATCCAC AAGCGGTAAA
ACTGGTCGTG AAGTTGCTGA AGAAATTTTA CATGCTAATG GCATTTACGA TGTTGACGTC
GTTAAAGGCG AAGGTTTCTT AACTGATCAC TATGACCCAA ATAAAAAAGT TGTTTGTTTA
TCTCCTGCAA ACTACGATAG ACCATCAGTT GCTGGTACTG CAATTGCAGC CCATGAAGTA
GGACATGCAA TTCAACATCA GCAAGGATAC GCACCATTAA GATTTAGAAC AGCATTAGTA
CCATTAGCTA ATATTGGTAG TTCTTTAAGC TACATTATTA TTATGGTAGG TATTGTTTTA
ACAGCTCTCG GTAGTGTCTT TGGCTCTACA GTTCTATGGG TTGGTGCTGG TTTAATGTCA
CTTGCAGTTT TATTCTCTAT CGTGACATTA CCTGTTGAGT TTAACGCTAG TTCAAGAGCG
ATGAAACAAA TAACAGCTTT AAATATCGTT AATGAGAAAG AATACAAACA CGCGAAAAAA
GTTTTATCTG CAGCAGCAAT GACATATGTG GCATCTACTG CAGTTGCGTT AGCTGAACTT
GCTCGTATTA TATTAATTGC AAGATCAAGT GATTAA
 
Protein sequence
MSLISMIIYF VILMVIPMWA QHKVKSNYEK YSQVRSTSGK TGREVAEEIL HANGIYDVDV 
VKGEGFLTDH YDPNKKVVCL SPANYDRPSV AGTAIAAHEV GHAIQHQQGY APLRFRTALV
PLANIGSSLS YIIIMVGIVL TALGSVFGST VLWVGAGLMS LAVLFSIVTL PVEFNASSRA
MKQITALNIV NEKEYKHAKK VLSAAAMTYV ASTAVALAEL ARIILIARSS D