Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP1012 |
Symbol | |
ID | 3242043 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | - |
Start bp | 1054324 |
End bp | 1055202 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 637167666 |
Product | 5'-3' exonuclease, putative |
Protein accession | YP_188589 |
Protein GI | 57866934 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0258] 5'-3' exonuclease (including N-terminal domain of PolI) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.667651 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTCAAA GAGTATTGCT CGTTGATGGA ATGGCTTTAT TATTTAGACA TTTTTATGCA ACAAGCTTAC ACAATCAATT TATGTACAAT TCTAAAGGAA TTCCTACAAA TGGTATTCAA GGTTTTGTAA GACATATTTT TAGCGCTATC AAGGAAATCG AACCTACTCA CGTAGCAGTT TGTTGGGATA TGGGGCAAGA AACATTCAGA AATGAAATGT ATGATGGCTA TAAACAAAAT CGCCCAGCAC CTCCTGATGA ACTTATTCCT CAATTCGATT ATGTTAAAGA AATATCCCAT CAGTTTGGTT TTGTAAATGT TGGTAAGCGT AATTATGAAG CTGATGATAT TATTGGCAGT TTAGCGGAAA CATATTCACA AGAACATGAA GTTTATATCA TTACCGGAGA CCGAGACTTA CTCCAATGCA TTAATCATAA TGTAGAAGTT TGGCTTATAA AAAAAGGTTT TACAATCTAT CAACGTTACA CGCTTGATCG TTTCATTGAT GAATACGGGC TTAATCCTCA ACAATTAATA GATGTTAAAG CTTTTATGGG TGATACAGCA GATGGCTATT CTGGTGTAAA AGGGATAGGT GAAAAAACAG CAATTAAATT AATTCAAAAT CATGGAACTG TCGAAAATGT AGTGAACAAT TTATCATCAT TAACTCCCGC TCAACAGAAA AAAATAACAA ATAATTTAAA TCATCTGCAT TTATCAAAAT CACTCGCAGA AATATATACC AAAGTTCCAA TTGAAACAGA CAAACTTTTT AAAGAGATGA CATATGCTCA TACACTAAAT GAGATTTTAT CCATTTGTAA TGAACATGAA CTATACGTTT CAAGTAAATA TATTGCAACT CACCTCTAA
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Protein sequence | MPQRVLLVDG MALLFRHFYA TSLHNQFMYN SKGIPTNGIQ GFVRHIFSAI KEIEPTHVAV CWDMGQETFR NEMYDGYKQN RPAPPDELIP QFDYVKEISH QFGFVNVGKR NYEADDIIGS LAETYSQEHE VYIITGDRDL LQCINHNVEV WLIKKGFTIY QRYTLDRFID EYGLNPQQLI DVKAFMGDTA DGYSGVKGIG EKTAIKLIQN HGTVENVVNN LSSLTPAQQK KITNNLNHLH LSKSLAEIYT KVPIETDKLF KEMTYAHTLN EILSICNEHE LYVSSKYIAT HL
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