Gene SERP0887 details

Gene Information

• Locus tag: SERP0887
• ID: 3242639
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Staphylococcus epidermidis RP62A
• Kingdom: Bacteria
• Replicon accession: NC_002976
• Strand: +
• Start bp: 900121
• End bp: 900852
• Gene Length: 732 bp
• Protein Length: 243 aa
• Translation table: 11
• GC content: 30%
• IMG OID: 637167544
• Product: ABC transporter, permease protein
• Protein accession: YP_188467
• Protein GI: 57866788

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.00136851
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGATATCAA CTTATTTTAA AATAGAATTA AAGATTATAT TTAGAAAGAA ATTGTATTTA 
GTTATGTCCA TATTCCTACC TGTCGTGTTT TATTTATTAT TTACTTCTAT ATTAGACATG 
CCAGAAGAAG CAAAACTTAA GTTTTATAAA GAGTATATGT ACAGTATGAC AGTATTTAGT 
TTAATGAACT TTTGTCTATT GTCATTTCCA TTAGATTTGA TTGAAGAGCG AAATCAAGGT 
TGGTATAAGC GGTTAATGGT GACCCCATTA TCATCATTTC AATATTATTT AGTTAAAATT 
AGTAAGACAA TGTGTCAGTT TTTAATAGCA ATTATAATTA TTTTTTCAGT AGCTCATTTT 
TACAAAGATG TTCACATGAC TGTTTTTCAA TGGATATTCT CTGCATTAAC TTTATGGATT 
GGGGTTAGTT TATTTTTGAC TTTAGGATTG ATTATCGCTC AACTCAACGA TATTCAAAAA 
GCAAGTAGTT TTGCCAATTT ACTTAATATT ACACTAGCTA TATTAGGAGG TCTATGGTTT 
CCAGTATACA CGTTTCCTGA TTGGCTTCAG TCGATTTCTA AACACATGCC AACATATAAT 
TTAAAGCTAC TTGCTATAGA TTTAGCGCAA AATAAAGGGG TGGATATAGA AGCGTTTGGC 
TATCTCGTGG TCTATTGTAT AATCTTTTTG AGTATTGCTT TATTCATGAA TAAGAAAGGA 
GATGTACCCT AA 

 

Protein sequence

MISTYFKIEL KIIFRKKLYL VMSIFLPVVF YLLFTSILDM PEEAKLKFYK EYMYSMTVFS 
LMNFCLLSFP LDLIEERNQG WYKRLMVTPL SSFQYYLVKI SKTMCQFLIA IIIIFSVAHF 
YKDVHMTVFQ WIFSALTLWI GVSLFLTLGL IIAQLNDIQK ASSFANLLNI TLAILGGLWF 
PVYTFPDWLQ SISKHMPTYN LKLLAIDLAQ NKGVDIEAFG YLVVYCIIFL SIALFMNKKG 
DVP