Gene SERP0886 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSERP0886 
Symbol 
ID3242638 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStaphylococcus epidermidis RP62A 
KingdomBacteria 
Replicon accessionNC_002976 
Strand
Start bp899249 
End bp900124 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content27% 
IMG OID637167543 
ProductABC transporter, ATP-binding protein 
Protein accessionYP_188466 
Protein GI57866787 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00203373 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGAAC TTCGACATAT ATCTAAATCT TTCAAGGAAC ATAAAGTTTT AGAAGATATA 
AGTATTGATA TAAAAAATAA TCGTTGTACG GCATTAATCG GTAAAAATGG AGCAGGTAAG
TCAACGTTAA TTGATATTAT TATTGGAAAT AATCACTATG ATAGTGGTCA AATCGCTGAT
AAATCAAATT TGTTAAATAA ACATAAAATG GGTATTCTTT TTCAAAAAAC GGAGTTTCCT
AAATACATAA AGGTTTGCGA ATTATTACAT TTATATCAAT CCTTTTATCA AACGTTTATT
TCTTTTCATC AATTTAAAGA AATTACACAA TTTAGTGACC GACAAATGAA TCAATTTGCA
TGTAATTTAT CAGGTGGACA GCAGAGAATT TTAGATTTTG CTTTAGCATT GGTAGGTAAA
CCTGAACTGT TAATTTTAGA TGAGCCTACG TCAGCTATGG ATGTAGAAAT GCGTCAACAT
TTTTGGAATG TTATAGAAAA ATTAAAAATG AATAACACTA CGATACTATA TACCTCTCAT
TACATTGAAG AAGTTGAAAG AATGGCTGAT CAAGTAATGA TGTTAGATAA AGGTAAAATT
CAATTAGATG ATTCACCTGA AAATATAAAA AGGAATCAAA GTTATTCTTT AATTCGAATT
CCTTGCAAAT ATCAAGAACT TATCAATCAA CTGAAACATA AATACGAAAT TAAATTAATA
AAAAATAGAT ATGAAATAAA AACAACTGAT GTGAGTGATG TTTTACAATT ATTGAAACAA
TATCATGTCA ATTTCAATAA GATTGAAATT CTTAAAAAAT CTTTATTAGA AGTCATGTTT
TCTAATGATT TGTCTAAAGG AGGGAATTAC CAGTGA
 
Protein sequence
MIELRHISKS FKEHKVLEDI SIDIKNNRCT ALIGKNGAGK STLIDIIIGN NHYDSGQIAD 
KSNLLNKHKM GILFQKTEFP KYIKVCELLH LYQSFYQTFI SFHQFKEITQ FSDRQMNQFA
CNLSGGQQRI LDFALALVGK PELLILDEPT SAMDVEMRQH FWNVIEKLKM NNTTILYTSH
YIEEVERMAD QVMMLDKGKI QLDDSPENIK RNQSYSLIRI PCKYQELINQ LKHKYEIKLI
KNRYEIKTTD VSDVLQLLKQ YHVNFNKIEI LKKSLLEVMF SNDLSKGGNY Q