Gene SERP0678 details

Gene Information

• Locus tag: SERP0678
• Symbol: def
• ID: 3240844
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Staphylococcus epidermidis RP62A
• Kingdom: Bacteria
• Replicon accession: NC_002976
• Strand: -
• Start bp: 673977
• End bp: 674528
• Gene Length: 552 bp
• Protein Length: 183 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 637167338
• Product: peptide deformylase
• Protein accession: YP_188262
• Protein GI: 57866596
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0242] N-formylmethionyl-tRNA deformylase
• TIGRFAM ID: [TIGR00079] peptide deformylase

Plasmid Coverage information

• Num covering plasmid clones: 36
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATAACAA TGAAAGATAT TATAAGAGAT GGTCATCCAA CACTTCGTGA AAAAGCGAAA 
GAATTAAGCT TCCCACTTTC TAACAATGAT AAAGAAACAT TGCGCGCAAT GCGTGAATTT 
CTAATCAATA GTCAGGATGA AGAAACCGCA AAACGTTATG GTTTACGTTC TGGCGTAGGT 
TTAGCTGCTC CACAAATTAA TGAACCAAAA CGTATGATTG CTGTCTACTT ACCTGATGAT 
GGAAACGGTA AATCGTATGA TTATATGCTC GTAAATCCTA AAATAATGAG TTACAGTGTA 
CAAGAAGCTT ATTTACCAAC TGGCGAAGGT TGTCTAAGTG TTGATGAAAA CATCCCAGGT 
TTAGTGCATC GTCATCATAG AGTCACTATT AAAGCTCAAG ATATTGATGG AAATGATGTT 
AAATTACGTC TCAAAGGCTA TCCTGCAATT GTATTTCAAC ACGAAATTGA TCATCTAAAT 
GGCATTATGT TTTATGATTA TATTGATGCC AATGAACCTC TAAAACCACA TGAAGAGGCC 
GTAGAAGTCT AA 

 

Protein sequence

MITMKDIIRD GHPTLREKAK ELSFPLSNND KETLRAMREF LINSQDEETA KRYGLRSGVG 
LAAPQINEPK RMIAVYLPDD GNGKSYDYML VNPKIMSYSV QEAYLPTGEG CLSVDENIPG 
LVHRHHRVTI KAQDIDGNDV KLRLKGYPAI VFQHEIDHLN GIMFYDYIDA NEPLKPHEEA 
VEV