| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP0646 |
|---|
| Symbol | qoxB |
|---|
| ID | 3242752 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Staphylococcus epidermidis RP62A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_002976 |
|---|
| Strand | - |
|---|
| Start bp | 640787 |
|---|
| End bp | 641911 |
|---|
| Gene Length | 1125 bp |
|---|
| Protein Length | 374 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 637167307 |
|---|
| Product | quinol oxidase, subunit II |
|---|
| Protein accession | YP_188231 |
|---|
| Protein GI | 57866538 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2 |
|---|
| TIGRFAM ID | [TIGR01432] cytochrome aa3 quinol oxidase, subunit II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.519241 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTCAAAAT TTAAGTCTTT GCTTCTATTA TTTGGCACAC TAATTTTACT TAGTGGTTGT
TCAAATATAG AAGTTTTTAA TGCAAAAGGG CCAGTAGCAA GCAGTCAGAA GTTCTTGATT
ATCTATTCAA TAATTTTCAT GCTTGTTATT GTTGCTGTAG TGCTTTCCAT GTTCGCTATT
TTTATTTTTA AATATAGCTA CAAAAAGAAT AGCGAATCTG GTAAGATGCA CCACAATTCT
CTAATTGAAA CAATTTGGTT TGTGGTACCT ATTTTAATCG TAATTGCTTT AGCTATTCCT
ACAGTTAAAA CTTTATACGA TTATGAAAAA CCACCAGAAA AAGACAAAGA TCCACTTGTC
GTTTACGCAG TAAGTGCTGG CTATAAATGG TTCTTTGCCT ACCCTGATCA ACATATTGAA
ACTGTTAACA CATTAACAAT TCCTAAAGAT CGACCAGTTG TATTCAAGCT TCAATCTATG
GATACAATGA CAAGTTTCTG GATTCCACAA TTAGGTGGTC AGAAATATGC CATGACTGGT
ATGACTATGA ATTGGACTTT AACAGCTGAT CAATTAGGTA CTTTCAGAGG TCGTAACTCA
AACTTCAATG GTGAGGGATT CTCTCGTCAA ACATTTAAAG TTCACTCTGT AAGTCAAAAT
GATTTTGATA AGTGGGTAAA AGAGGCTAAA GGTAAGAAAA CTTTAAGTCA AGATACTTTT
GACAAGCAAC TCTTACCAAG CACATCTAAC AAAGAATTAA CATTTAGTGG AACTCATATG
GCGTTTGTTG ACCCTGCGGC TGATCCAGAG TATATCTTCT ACGCTTACAA ACGTTACAAC
TTTGAACAAA AAGATCCTAA CTTCACAGCT GAAGAGGATT TATACAAAGA TGTAAAAGAT
AAACCAATCA AACCTGCTCG TAAGGTTCAT ATAACAAACC CTAACTATGA ACGTCACGGT
ATGAAACCTA TGATTCTCGG CAACAATGAA AAATACGATA ATGAGTTCAA AAAAGAAGAG
GATCATAACT CTAAAGAAAT GGAAAAAATT TCTAAGGGAG CAAAAGACGA AAATGCGTCT
AAACTTCACA AAAAAGAACA CGATGATCAT GGAGGTGGAC ATTAA
|
|---|
| Protein sequence | MSKFKSLLLL FGTLILLSGC SNIEVFNAKG PVASSQKFLI IYSIIFMLVI VAVVLSMFAI
FIFKYSYKKN SESGKMHHNS LIETIWFVVP ILIVIALAIP TVKTLYDYEK PPEKDKDPLV
VYAVSAGYKW FFAYPDQHIE TVNTLTIPKD RPVVFKLQSM DTMTSFWIPQ LGGQKYAMTG
MTMNWTLTAD QLGTFRGRNS NFNGEGFSRQ TFKVHSVSQN DFDKWVKEAK GKKTLSQDTF
DKQLLPSTSN KELTFSGTHM AFVDPAADPE YIFYAYKRYN FEQKDPNFTA EEDLYKDVKD
KPIKPARKVH ITNPNYERHG MKPMILGNNE KYDNEFKKEE DHNSKEMEKI SKGAKDENAS
KLHKKEHDDH GGGH
|
|---|
| |