Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SERP0529 |
Symbol | |
ID | 3240648 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Staphylococcus epidermidis RP62A |
Kingdom | Bacteria |
Replicon accession | NC_002976 |
Strand | + |
Start bp | 513929 |
End bp | 515245 |
Gene Length | 1317 bp |
Protein Length | 438 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 637167195 |
Product | hypothetical protein |
Protein accession | YP_188121 |
Protein GI | 57866479 |
COG category | [R] General function prediction only |
COG ID | [COG2056] Predicted permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0114104 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATAAATG CTGTTGTAAT CGCAGTCATA TTAATGATCA TACTCTGTTT ATGTCGATTA AATGTGGTCA TTAGCTTATT TATTAGTGCA CTTGTCGGTG GATTAATATC AGGTATGAAT TTAGAAAAAG TAATTAATGT TTTTGGAAAA AATATAGTAG ATGGCGCAGA AGTCGCATTA AGTTATGCGT TACTCGGTGG TTTTGCTGCT TTGATTTCAT ATAGTGGTAT AACTGATTAT CTTGTTGGTA AAATTATTGC AAGTATTCAT GCTGAAAATA GTAGACTTTC CCGAGTTAAG GTTAAAATAA TTATTATCAT TGCATTGTTA GCAATGAGTA TCATGAGTCA AAACTTAATT CCTGTACATA TTGCCTTTAT TCCAATTGTA ATACCTCCGC TTGTGAGTTT GTTTAACGAT TTAAGAATTG ATCGCAGACT TATTGCTTTA GTAATAGGAT TTGGTTTGTG TTTTCCTTAC GTGCTATTAC CTTATGGTTT CGGTCAAATT TTCCATCAAA TCATTCAAAG TGGTTTTCAA AAAGCAAACC ATCCAATTGA GATGAACATG ATATGGAAGG CGATGTTAAT ACCTTCAATG GGATATGTTG TGGGTCTCAT ACTTGGATTT ATTGTTTATA GAAAGCCACG CGTTTATGAA CAACGTAATG TAAATGATCG AGAAACAATT TCGGAACTCA AACCTTATGT GCTAATTGTT ACTGTCATTG CCATACTAGC TACGTTTTTA GTACAGACAT TTACAGATTC TATGATTTTT GGTGCGTTAG CTGGGGTACT TGTTTTCTTT GTTTCAAGAG CTTATCGTTG GTATGAACTC GATGAACAAT TTGTAGATGG AGTCAAATTA ATGGCTTATA TTGGTGTAGT GATACTAACA GCTAACGGGT TTGCTGGCGT GATGAATGCA ACAGGTGATA TAGATAGCTT AGTCAAGAGT TTAACAGGAT TAACTGGAGA TCATAAATTG ATTAGTATTA TCGTCATGTA CCTCATTGGA CTTATTGTAA CATTAGGTAT TGGTTCCTCT TTTGCAACAA TACCTATTAT TGCTTCATTA TTTATACCTT TTGGAGCATC AATTGGTTTA GACACAATGG CTCTTATTGC TTTAATTGGT ACAGCAAGTG CTTTAGGTGA TTCAGGTTCT CCAGCAAGTG ATTCTACACT TGGACCGACA GCCGGTTTGA ATATGGATGG ACAACATGAT CATATTCGTG ATACATGTAT CCCGAATTTC TTATTTTATA ATGTTCCCCT TATGGTTTTT GGTACGATAG CAGCTATGGT ACTATAA
|
Protein sequence | MINAVVIAVI LMIILCLCRL NVVISLFISA LVGGLISGMN LEKVINVFGK NIVDGAEVAL SYALLGGFAA LISYSGITDY LVGKIIASIH AENSRLSRVK VKIIIIIALL AMSIMSQNLI PVHIAFIPIV IPPLVSLFND LRIDRRLIAL VIGFGLCFPY VLLPYGFGQI FHQIIQSGFQ KANHPIEMNM IWKAMLIPSM GYVVGLILGF IVYRKPRVYE QRNVNDRETI SELKPYVLIV TVIAILATFL VQTFTDSMIF GALAGVLVFF VSRAYRWYEL DEQFVDGVKL MAYIGVVILT ANGFAGVMNA TGDIDSLVKS LTGLTGDHKL ISIIVMYLIG LIVTLGIGSS FATIPIIASL FIPFGASIGL DTMALIALIG TASALGDSGS PASDSTLGPT AGLNMDGQHD HIRDTCIPNF LFYNVPLMVF GTIAAMVL
|
| |