Gene SERP0098 details

Gene Information

• Locus tag: SERP0098
• ID: 3240539
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Staphylococcus epidermidis RP62A
• Kingdom: Bacteria
• Replicon accession: NC_002976
• Strand: +
• Start bp: 82826
• End bp: 83485
• Gene Length: 660 bp
• Protein Length: 219 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 637166748
• Product: ABC transporter, permease protein
• Protein accession: YP_187695
• Protein GI: 57866080
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG2011] ABC-type metal ion transport system, permease component

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 0.712322
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTGGTT CAAGTTTAGA TTCATCTCAA TTATTACAAG CTCTATACGA AACATTGTAT 
ATGGTGACTG TATCACTTGT AATCGGTGCT TTAATAGGTA TACCTCTTGG CATCTTGTTA 
GTGGTAACTA GAAAAAACGG TATATGGTCG AATACAATAT TGCATCAAGT ATTAAATCCT 
ATCATTAATA TTTTAAGATC AATTCCGTTC ATTATTTTAT TAATAGCCAT AGTGCCTTTT 
ACTAAATTGC TAGTTGGCAC ATCTATCGGC ACAACAGCAG CCATAGTACC ACTCACGGTT 
TATGTAGCAC CTTATATCGC ACGCTTAGTA GAAAACTCAT TACTGGAAGT CGATGACGGG 
ATTATTGAGG CAGCTAAAGC AATGGGTGCA TCACCTCTTC AAATTATACG TTATTTTTTA 
TTGCCAGAAG CACTTGGTTC ATTAATTCTA GCTATAACTA CAGCTATTAT TGGTCTCATA 
GGTAGTACAG CAATGGCTGG TGCTGTTGGT GGTGGCGGTA TAGGTGATTT GGCTTTAGTG 
TATGGTTATC AACGATTCGA TACAATTGTC ATTGTGATTA CAGTCATTGT ACTTATTATT 
ATTGTTCAAA TTATACAAAC GTTAGGTAAC TTTATCGCTA GGGTTATCCG TAGAAATTAA 

 

Protein sequence

MFGSSLDSSQ LLQALYETLY MVTVSLVIGA LIGIPLGILL VVTRKNGIWS NTILHQVLNP 
IINILRSIPF IILLIAIVPF TKLLVGTSIG TTAAIVPLTV YVAPYIARLV ENSLLEVDDG 
IIEAAKAMGA SPLQIIRYFL LPEALGSLIL AITTAIIGLI GSTAMAGAVG GGGIGDLALV 
YGYQRFDTIV IVITVIVLII IVQIIQTLGN FIARVIRRN