| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SERP0078 |
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| Symbol | pfoR |
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| ID | 3242567 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Staphylococcus epidermidis RP62A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_002976 |
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| Strand | + |
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| Start bp | 65272 |
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| End bp | 66300 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637166728 |
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| Product | perfringolysin O regulator protein |
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| Protein accession | YP_187675 |
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| Protein GI | 57866038 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1299] Phosphotransferase system, fructose-specific IIC component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGATTTGC TTATAGGTAC TTTATTTTTA ATTTTAGTTT TAGTTATTTT TACTCTATTT
ACATACAAAG CACCTAGTGG GATGAGGGCG ATGGGAGCTT TAGCGAATGC GGCGATTGCA
TCGTTTTTAG TTGAAGCTTT CAATAAATAT GTGGGTGGTC AAGTATTTGG GATTAAATTC
TTAGAAGAAC TGGGAGATGC TGCTGGAGGT TTAGGTGGTG TGGCTGCGGC TGGATTAACT
GCATTAGCGA TTGGGGTATC TCCAGTTTAT GCACTAGTTA TTGGGGCAGC TTGTGGAGGT
ATGGACTTGT TACCAGGATT TTTCGCTGGG TATATTGTAG GCTACATGAT GAAGTATACC
GAGAAATATG TGCCAGACGG TATTGATTTA ATTGGTTCAA TCATTCTTCT CGCACCTATA
GCTAGGTTAA TTGCTACTGG ATTGACGCCA GTGGTTAATA ACACGTTAAT TAAAATTGGG
GATATTATAC AAAGTAGTAC AGATGCTAAC CCGTTGATTA TGGGAATTGT ATTGGGAGGT
ATTATTACAG TAGTAGGTAC TGCTCCATTA AGTTCAATGG CTCTCACTGC ATTGCTTGGT
TTAACGGGTG CGCCTATGGC TATAGGTGCC ATGGCCGCAT TTAGTTCCGC GTTTATGAAT
AGTGCATTGT TCCATCGTTT GAAATTGGGA GACCGTAAAT CAACCATTTC AGTCGGAATC
GAACCGCTTT CTCAAGCTGA TATTGTTTCC GCTAATCCTA TTCCTATTTA TGTCACTAAT
TTCTTTGGTG GGGCAATTGC CGGTATTATA ATTGCTTGGT CAGGTATGAT TAATAATGCA
ACTGGCACTG CTACACCTAT TGCAGGTTTT TTAGTGATGT TTGGTTTTAA TAGTTTAACG
AAAGTGATTA TCTATGGTGT GGTTATGGCG ATTATAGGAA CTATTGCTGG TATTGTAGGG
TCTATTGTTT TCAAAAAGTA CCCCATTATT ACTAAAAAGC AAATGTTAGA ACGGGACACA
ACGACATAA
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| Protein sequence | MDLLIGTLFL ILVLVIFTLF TYKAPSGMRA MGALANAAIA SFLVEAFNKY VGGQVFGIKF
LEELGDAAGG LGGVAAAGLT ALAIGVSPVY ALVIGAACGG MDLLPGFFAG YIVGYMMKYT
EKYVPDGIDL IGSIILLAPI ARLIATGLTP VVNNTLIKIG DIIQSSTDAN PLIMGIVLGG
IITVVGTAPL SSMALTALLG LTGAPMAIGA MAAFSSAFMN SALFHRLKLG DRKSTISVGI
EPLSQADIVS ANPIPIYVTN FFGGAIAGII IAWSGMINNA TGTATPIAGF LVMFGFNSLT
KVIIYGVVMA IIGTIAGIVG SIVFKKYPII TKKQMLERDT TT
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