Gene SAG1895 details

Gene Information

• Locus tag: SAG1895
• Symbol: def
• ID: 1014705
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Streptococcus agalactiae 2603V/R
• Kingdom: Bacteria
• Replicon accession: NC_004116
• Strand: +
• Start bp: 1875794
• End bp: 1876408
• Gene Length: 615 bp
• Protein Length: 204 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 637317063
• Product: peptide deformylase
• Protein accession: NP_688884
• Protein GI: 22538033
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0242] N-formylmethionyl-tRNA deformylase
• TIGRFAM ID: [TIGR00079] peptide deformylase

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.000101178
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTGCTA TTGATAAATT AGTAAAAGCT AGTCATTTAA TTGACATGAA TGACATTATC 
CGTGAAGGCA ATCCAACCCT TCGCAAAGTG GCTGAAGAAG TCACATTCCC ACTTTCTGAG 
AAAGAAGAAA TTCTCGGAGA AAAAATGATG CAATTTTTAA AACACTCTCA AGATCCAATT 
ATGGCTGAGA AGCTAGGCTT ACGTGGTGGT GTTGGTTTAG CCGCACCACA ATTAGACATC 
TCAAAACGCA TCATTGCCGT CCTTGTTCCA AACGTTGAGG ATGCTCAAGG AAATCCACCT 
AAAGAAGCTT ATAGCCTCCA AGAAGTAATG TACAACCCTA AAGTTGTATC GCATTCTGTT 
CAAGATGCTG CTTTATCTGA CGGGGAGGGA TGCCTATCAG TAGATCGTGA AGTACCTGGC 
TATGTCGTCC GCCACGCGCG TGTAACTATT GAATATTTCG ACAAAACTGG TGAAAAACAT 
CGACTCAAAT TAAAAGGTTA CAACTCTATT GTTGTTCAAC ATGAAATTGA CCACATTGAT 
GGTATTATGT TTTACGACCG TATCAATGAG AAAAATCCTT TCGCTGTCAA AGAAGGCTTA 
CTTATTTTAG AATAA 

 

Protein sequence

MSAIDKLVKA SHLIDMNDII REGNPTLRKV AEEVTFPLSE KEEILGEKMM QFLKHSQDPI 
MAEKLGLRGG VGLAAPQLDI SKRIIAVLVP NVEDAQGNPP KEAYSLQEVM YNPKVVSHSV 
QDAALSDGEG CLSVDREVPG YVVRHARVTI EYFDKTGEKH RLKLKGYNSI VVQHEIDHID 
GIMFYDRINE KNPFAVKEGL LILE