Gene Rxyl_3139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_3139 
Symbol 
ID4114938 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand+ 
Start bp3153031 
End bp3153759 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content71% 
IMG OID638037906 
Productmembrane spanning protein 
Protein accessionYP_645858 
Protein GI108805921 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCAATCTG TCCTCAACGG GATATTGACC CTGCTCGGGT TTCTGGGCGA GGGGCTGCGA 
AGCGTGGCCC CGGTCATCGG CATCCTGCTC GTCTTCCAGC TTTTGGTGCT GCGGGCGCCG 
CTGGAGAACT GGCGCGAGAT CGCCGCGGGG CTGGTGTTGA CCGTCATCGG GCTGGTGGTC 
TTCCTCAAGG GGCTGGAGAT AGGGCTCATC CCCCTGGGGG AGGCGGCCTC CGGGGCCCTT 
GCCCGCCGCG GCTCGCTCTT TCTGGTGGTC CTCTTCGGGC TGGCGATGGG CTACGGTGCC 
ACGCTCGCCG AGCCCGCGCT CCGGATCCTC GCCGAGCGGG TCGAGAGCCT GACGGGCGGG 
GCCCTGGGCG CCGGCCTCTT CGTGCAGACG GTGGCCGTGG GGGTGGCTCT GGGGCTCGGC 
GTGGGCGCCG CCCGCATCGT GCTCGGGATA GAGATCACGC CGTTCTTCAT CCCCGCGCTC 
GCGCTGGCGC TCGTGCTGAC CTTCTTCGCC CCGGAGCGCT ACACGGGGCT GGCCTTCGAC 
GCGGCCCTCG CGACCACGGG GCCGGTGACG GTGCCGCTCA CGATAGCCCT CGGGAGCGGG 
CTGGCGCTCG CGCTCGGGCG GGGAGACATC CTGGTCTACG GTTTCGGGCT CGTGGCGTTC 
ACGGCGCTGG GACCGATCCT GTGCGTGCTC GTGCTGGGCA TCATCCTCGG GGAGCCGGCG 
GGGGGTTAG
 
Protein sequence
MQSVLNGILT LLGFLGEGLR SVAPVIGILL VFQLLVLRAP LENWREIAAG LVLTVIGLVV 
FLKGLEIGLI PLGEAASGAL ARRGSLFLVV LFGLAMGYGA TLAEPALRIL AERVESLTGG 
ALGAGLFVQT VAVGVALGLG VGAARIVLGI EITPFFIPAL ALALVLTFFA PERYTGLAFD 
AALATTGPVT VPLTIALGSG LALALGRGDI LVYGFGLVAF TALGPILCVL VLGIILGEPA 
GG