Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_3055 |
Symbol | |
ID | 4114855 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | + |
Start bp | 3063087 |
End bp | 3063629 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 638037823 |
Product | 2',5' RNA ligase |
Protein accession | YP_645775 |
Protein GI | 108805838 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1514] 2'-5' RNA ligase |
TIGRFAM ID | [TIGR02258] 2'-5' RNA ligase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGGGCCT TCGTGGCGAT CCTCCCCCCG CCGGAGGTCA GGGAGGCGCT CTCTCGGGCG GCCCGCTCCC TCCCGGTGAT CGGGGTGCGC TGGGTGCGCC CGGAGAACAT CCACCTGACG CTGAAGTTCC TCGGCGAGAT TTCGGAGGAG CAGGCCCCGC AGATAGCCTC CGCCCTCGCA CAGGTCGCCC GCCTCCGGCG CCCCTTCCGC ATCGAGCCCG AGGGCCTCGG GGCCTTCCCC TCCCCCGAGC GGGCGCGCGT CCTCTGGGCC GGGGTCGGGG AGGGCTCGGC CAGCCTGGAG GAGCTCGCCG CGGCGGTGGA GGAGGCGCTC TTCCCCCTAG GCTTCGGGCG CGAGCAGCGG CCCTTCCGGG CGCACCTGAC CCTCGGGCGC GCCAGGGGAC GCCCGGCCCG GCTGGAGGCG GGGAGGCTCG ACCCCGGAAT ACCCGGCTTC ACCGCCGGCT CGCTGCACCT GATGAGGAGC GCGCAGGGCC CCTCGGGGGT GTACTACGAG AGCCTCGCGG AGCATCCCTT CTCAGAACGC TGA
|
Protein sequence | MRAFVAILPP PEVREALSRA ARSLPVIGVR WVRPENIHLT LKFLGEISEE QAPQIASALA QVARLRRPFR IEPEGLGAFP SPERARVLWA GVGEGSASLE ELAAAVEEAL FPLGFGREQR PFRAHLTLGR ARGRPARLEA GRLDPGIPGF TAGSLHLMRS AQGPSGVYYE SLAEHPFSER
|
| |