Gene Rxyl_2816 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_2816 
Symbol 
ID4117648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp2823978 
End bp2824424 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content68% 
IMG OID638037587 
Producthypothetical protein 
Protein accessionYP_645541 
Protein GI108805604 
COG category[S] Function unknown 
COG ID[COG3296] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCCGC AGCAGCAGAA CTACGGGATG GCGGGCGGGC ACCAGGGAGC GCACCAGGGG 
CAGCGGGGGC CGGTGGTGGT CATGACGCAG GAGGAGAGGA CGTGGTCGGT GCTCGCGCAC
CTGAGCATGT TCCTGAACCT GGTGACGGGC TTCCTGGGTC CGGTGGCGGC GCTGGTCGTG
TGGCTCGTCT TCAGGGACCG CTCGCGGAGG GTGGCGTTCA ACGCGCTGCA GTCGATGTGG
TACCAGGTGG CGTGGGTCGT GATCCTCGCC GTGGGCTGGA CGGTCACGGG CCTGCTGACG
ATCGTGCTGA TCGGCTTCCT CCTCATCCCG GTGATGGCGC TGGTGAGCAT CGTGCCCTTC
GTGCACGCGG CCTACGCGGC CTACCGGGTG AGCCGGGACG GCGAGTACCG CTACCCGTTT
ATCGCCGACA TGATCGAGTC CCGTTAG
 
Protein sequence
MDPQQQNYGM AGGHQGAHQG QRGPVVVMTQ EERTWSVLAH LSMFLNLVTG FLGPVAALVV 
WLVFRDRSRR VAFNALQSMW YQVAWVVILA VGWTVTGLLT IVLIGFLLIP VMALVSIVPF
VHAAYAAYRV SRDGEYRYPF IADMIESR