| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_2672 |
|---|
| Symbol | |
|---|
| ID | 4115153 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | - |
|---|
| Start bp | 2688651 |
|---|
| End bp | 2690138 |
|---|
| Gene Length | 1488 bp |
|---|
| Protein Length | 495 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 638037447 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_645401 |
|---|
| Protein GI | 108805464 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGGAG CGGAGAAGAG GCGGGCGTGC GTCGGAAGGG GCCTGCTGCT CGTGCTGCTC
GCCGCCGTCG CCCTCCTGTG CGGCGAGCGG GGGACGGTGC TCGCCGCCGG CGCGCAGTCC
ATCGCCGTCC CCTCTTACTT CTACCCGGGC GGCGCGTGGG ACCGGCTGGG CGCCTCCTTC
CCGGAGGCCC GCCTCGCCAT CATAAACCCG GCCAGCGGAC CCGGGGAGGC CCCTAACCCG
GACTACGCCG CGCAGGTGCG GGAGAGCCGG GCGGCGGGGC TCACGGTGCT CGGGTACGTG
CACACCAGCT ACGCGGCCCG ACCCGTGGAG GAGGTGAGGG CCGAGATCGA CCGCTACTAC
GGCTGGTACG GGGTGGACGG CATCTTTCTG GACGAGGCGA GCACCGGCTG CGCCGACCAG
CCCTACTACG CCGGGCTCTA CGGCTACGTA AAGGCTAGGG GCGGGCTGGT GGTCCTCAAC
CCGGGCACCC AGACCAGCGA ATGCTACATG TCCGCGTCGG ACATCGTCGT AAACTTCGAG
GGCTCCCACG CCTCCTACGC CGGGGGGTAC TCGGCGCCGG CGTGGGTCTC CGGCTACCCG
CCGGAGCGCT TCTGGCACCT CGTCTACGCC GCCCCCGGCG AGGAGCAGAT GCTGGAGGCC
GTCTACCTGA GCAAGCGCCG CAACGCGGGC TGGGTCTACG TGACCCCGGA CGAGCTGCCG
AACCCCTGGG ACACCCTCCC CGGCGCCGCC TACTGGGAGG CGGAGCGCCG GGCGGCGGCC
GACGGCGCGG ACGAGACGCC GCCTGGGGTT TCCGCCCCGG CGGAGAACCT CGTCCTCTAC
TCGCAGCTGG GCCCCGGGGA GGGGCCGGTG CCGGTCCGGG TGGTGTGGTC CGGTTCGGAC
GGCCAGAGCG GCGTGGCGGG CTACGAGCTG GAGCACGGCG AGAACGGGGG ACCCTTCGAG
GCGGTGCCGC TGCCCGCTCC CTCCGCCACC GCGGTGACGC TCCGGCTCTC GCCCGGCGAG
CACGCCTTCC GGGTGCGGGG GCTGGACCGG GCCGGGAACG CGAGCGCGTG GGCCGCATCC
CCGGTGTTCT CGCTCGTCGC CCGGCAGGAG GACGGGGCAG GGGTCTCCTA CCCGGCGGGC
CGGTGGAGGC TCGCCCAGAC CTCCGGCGCC TACGGCGGGG AGCTGAGGTA CGAGAAGGAT
CCCCCGGCGA CGGCCCGGTT CTCCTTCGCG GCCCGGGAGG TGGCCTGGGT GTCGGCGCGG
GGGCCGAACC GGGGCAGGGC CGAGGTGTGG GTGGACGGGG CCCGGGCGGC GACCGTGGAC
CTCTACTCCG GGACCGCCCG GGCGCGGGAG GTCGTCTTCC GCCGGGACTT CGGGGGCCGG
GGCGCGCACT CGCTCGAGGT CCGGCCGCTG GGGGTCGGGG ACGAGCTCTC GACGGGGACC
CGGGTGGACG TGGACGCCTT CTTGATCATC GACCAGGGGA CTCCGTAA
|
|---|
| Protein sequence | MTGAEKRRAC VGRGLLLVLL AAVALLCGER GTVLAAGAQS IAVPSYFYPG GAWDRLGASF
PEARLAIINP ASGPGEAPNP DYAAQVRESR AAGLTVLGYV HTSYAARPVE EVRAEIDRYY
GWYGVDGIFL DEASTGCADQ PYYAGLYGYV KARGGLVVLN PGTQTSECYM SASDIVVNFE
GSHASYAGGY SAPAWVSGYP PERFWHLVYA APGEEQMLEA VYLSKRRNAG WVYVTPDELP
NPWDTLPGAA YWEAERRAAA DGADETPPGV SAPAENLVLY SQLGPGEGPV PVRVVWSGSD
GQSGVAGYEL EHGENGGPFE AVPLPAPSAT AVTLRLSPGE HAFRVRGLDR AGNASAWAAS
PVFSLVARQE DGAGVSYPAG RWRLAQTSGA YGGELRYEKD PPATARFSFA AREVAWVSAR
GPNRGRAEVW VDGARAATVD LYSGTARARE VVFRRDFGGR GAHSLEVRPL GVGDELSTGT
RVDVDAFLII DQGTP
|
|---|
| |