Gene Rxyl_2647 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_2647 
Symbol 
ID4115108 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand+ 
Start bp2663996 
End bp2664643 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content74% 
IMG OID638037421 
Producthypothetical protein 
Protein accessionYP_645376 
Protein GI108805439 
COG category[S] Function unknown 
COG ID[COG2860] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCGAGC CCTCGGGATC GACGCTGATG CTGGCGCTGG ACCTCGCCGG GACCTTCGCC 
TTCGGGCTGA GCGGGGCCCT GGCCGGGGTG CGCGCTCGCC TGGACCTCTA CGGCGTCGTG 
GTGCTGGCCG CGGTGGTGGG GCTCGCCGGA GGGATCACCC GCGACATCCT GCTCGGGGCG 
CTGCCCCCGG CCACCTTCAG CGACTGGCGC TACCTGGCCA CCGTGGTCTG CGCCGCCCTC 
CTGACCTTCT TCGCCCACCC CACCCTGGAG CGCTTCTCGC GCCCGGTGGC CGTCTTCGAC 
GCCGCCGGCC TCTCGCTGTT CTGCGTCACC GGGGCGACCA AGGCCCTGGA CTTCCAGGTG 
GGGGCCGTGC AGGCGGTGCT GCTCGGCGTC ATCACCGCGA CCGGCGGGGG GATGCTGCGC 
GACGTGCTGG TGCGCGAGAT CCCGACGGTG CTGCGCAACG AGCTGTACGC CGTGCCCGCG 
CTCGTCGGGG CGTCCATCGT GGTCGCGGCC TCCAAGCTCG GCCACGACCC GGGGGTCGCC 
TCGGTGGCCG CGGCGGCGAC CTGCTTCCTC ATCCGCCTGG CGAGCCTGCG CTTCGGCATC 
GAGCTGCCCA CCGCCCCCAC CGACCGCGAC AAGCCCCCCG ACCGGTAG
 
Protein sequence
MPEPSGSTLM LALDLAGTFA FGLSGALAGV RARLDLYGVV VLAAVVGLAG GITRDILLGA 
LPPATFSDWR YLATVVCAAL LTFFAHPTLE RFSRPVAVFD AAGLSLFCVT GATKALDFQV 
GAVQAVLLGV ITATGGGMLR DVLVREIPTV LRNELYAVPA LVGASIVVAA SKLGHDPGVA 
SVAAAATCFL IRLASLRFGI ELPTAPTDRD KPPDR