Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_2461 |
Symbol | |
ID | 4115303 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | + |
Start bp | 2477006 |
End bp | 2477923 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 638037242 |
Product | xylose isomerase-like TIM barrel |
Protein accession | YP_645200 |
Protein GI | 108805263 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCTTCG GCAGCGTGGG GACGAACCTG AACGGCGGAA GCCTCGCCGG GGAGGGCTTT CTGGGGGCCC TGCGCCGGCT CGCCGGCTCG GGGGCGGACT TCGTGGAGGT CGGCCCGCAC GAGCTCGGCG CGATGCTCGG GGGCGAGCTC GTGCCGGAGA GGGTGCGCTC TCTGGAGCGC GCCCTCTCCG GCGCCGGGGT CGTCTACACC GTGCACGCCC CGCACGCCAT CAACCTCATG GACCCCGAAG ACCCCGCGGC CCACCTGGAC ATGCTGCGGG CGAGCGTGAG GTTCGCCGGG AGGATAGGCG CCCCGGTGGT CGTCTGCCAC GCCGGGCGCA GGGAGCCCCA CCACGCCCGC TGGCGGCCCG CCGAGCGGCT CGCCCGGGAG GCGGCGGCGC TGCGCGAGGT GGGGAGGCTC GCCGAGGAGC TCGGCGTGAC CATCGCCGTC GAGAACTCCT ACCCCGAGCC CCCGGTGGTA GCGGGGAGGG CCAGCGCCCC GGCCGCCCGG CCTTCGGCGC TGGCGGAGAG GGTCGCCGGG GTGGACCATC CCGCGGTGCG CGCCTGCCTG GACGTGGGGC ACGCCGCCGT CTCGGCGACG CTGCTCGGCT ACGACCTGCT GGAGGAGTGC GCCGTCCTCG GCCCGCTCAC GGCGCACGTG CACCTCCACG ACAACCTCGG CCGCCCGGAG CCCCGGCCCG GCATGAGCCT CCCCGAGCGG CTCGCCTCGG GGTTCGGGGA CCTGCACCTG CCGCCCGGAC GGGGAACCAT CCCGCTGCAG AGGCTGCTCG CCGAATCGGG GCTGCCCGAA GGGGTCTCCT GCTGCGTGGA GCTCGCCCCG GGATTCGAGG AGGCCGTGCC GGAGGCGCTC TCCGAGGCCC GGCGGCTCGG GGCGGCGGCG GTCGTAGCGG GAGGCTAG
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Protein sequence | MIFGSVGTNL NGGSLAGEGF LGALRRLAGS GADFVEVGPH ELGAMLGGEL VPERVRSLER ALSGAGVVYT VHAPHAINLM DPEDPAAHLD MLRASVRFAG RIGAPVVVCH AGRREPHHAR WRPAERLARE AAALREVGRL AEELGVTIAV ENSYPEPPVV AGRASAPAAR PSALAERVAG VDHPAVRACL DVGHAAVSAT LLGYDLLEEC AVLGPLTAHV HLHDNLGRPE PRPGMSLPER LASGFGDLHL PPGRGTIPLQ RLLAESGLPE GVSCCVELAP GFEEAVPEAL SEARRLGAAA VVAGG
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