| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_2345 |
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| Symbol | |
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| ID | 4115611 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 2355492 |
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| End bp | 2356964 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 638037125 |
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| Product | LigA |
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| Protein accession | YP_645085 |
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| Protein GI | 108805148 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.800961 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGGCTCTG GGGTGAAGGT GTCCGGCGCG TTGCGTATAC CGTGTACGCG GGTCTTGCTT
GCGGGGCTGG CTGCGGGGCT GGCCGCCTTC GTGGCGGCGT GGGCCGGTGG CGGGGCTGGT
GCGCAGCTGG CGGACGAGGG GCAGGATACC GGGAGCGACA GCCGGAGCTG CCGGCTGCAG
GACGCGCGGG CCGAGGGGCT CGTGCCGGGG GCCGAGGTCC AGGACGGGGA CTGTCTGCGG
GATCTCACGA CCGCGGGCAC CAGGAGGACC GGGCACACCG ACCCGAACGA CTGGGAGGGG
CTGCACGCCT CCGGGACCCG CAACCCGTCC GGGGTGCCGG GGCTGCAGGT CGACGGCTAC
TTCCCCGACG GCTCGGCGAC CAACACCAAC AACGGCTGGG CGCACGACGC GCAGTTCGTG
ATCCGGTTCC CCAACCGGTG GAACGGGAAG CTCGTGATCA CGGGTGCGCC CGGGGTCCGG
GAGCAGTACG CCAACGACTT CATCATCAGC GACTGGGTGC TGGCCCGGGG CTACGCCTTC
GCCGCCACCG ACAAGGGGAA CACGGGGACC GCCTTCTACC GGGACGGGAG GAGGCCCGGG
GACGCGGTGG CCGAGTGGCA CCGGCGGGTG GAGCAGCTCG CCCGGGCCGC CAAGGCGGCC
GCAGAGCGGT ACTACGGCCG GGCTCCCCGG CGCACCTACG TCACCGGCAT CTCCAACGGT
GGGTACCTCG CCCGCTACGC GCTCGAGAAC ACCCCCGGTC TCTACGATGG CGGGGTGGAC
TGGGAGGGGA CCCTCTTCCG CGCCCAGGGG CCCAACCTCC TCACCTTCCT TCCCCCCGCC
CTCAGAAACT ACCCCGAGTA CCGCGCCACC GGGAGCGAGG AGGCGCGAAG GGCCATCATC
CGGGCCGGCT TCGCTCCGGG ATCCGAGTTT CTGTGGGACT ACCACTACCT CGTCTACTGG
GACCTCACGC AGAGGATCTA CCGGGAGGAG TTCGACCCGG CCTACGACGG GGCGCTTCAG
GCCGGCATCC CCTTCTGTCA GGAGGGGACA CCCAACTGCG ACGCCGACTA CGAGTACGCC
GAGAGGCCCC GCAGCGTAAA GGAGGCGGTG GGGCGGGTCT CCAACACCGG CCGGATCGGG
CGTCCCATGA TCACGCTGCA CGGCGACCTG GACGCCCTGC TCCCCGTAAG GGTCGACTCC
GACGTCTACC GGCGGCTCGT CGAGCGGGCG GGGCGCGCCG GGATCCACCG CTACATCGTC
GTCGGGAGGG GCAACCACGT GGACGGGCTC TACGACCGCT ACCCGGAGCG GCTGCGGCCC
ATCCTGCCCT GCTACCGGGC CGCGTTTTTG GCCCTGGACC GCTACGTCGA AGGGCGGGGG
AGCCTTCCCA GAAACGGCTT TCTCCCCAGG CCCGAGAGCG GGGACGTGGT CAACCGCTGC
GACCTGGGAG AGGTGAGGGT CCACCGTGGG TGA
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| Protein sequence | MGSGVKVSGA LRIPCTRVLL AGLAAGLAAF VAAWAGGGAG AQLADEGQDT GSDSRSCRLQ
DARAEGLVPG AEVQDGDCLR DLTTAGTRRT GHTDPNDWEG LHASGTRNPS GVPGLQVDGY
FPDGSATNTN NGWAHDAQFV IRFPNRWNGK LVITGAPGVR EQYANDFIIS DWVLARGYAF
AATDKGNTGT AFYRDGRRPG DAVAEWHRRV EQLARAAKAA AERYYGRAPR RTYVTGISNG
GYLARYALEN TPGLYDGGVD WEGTLFRAQG PNLLTFLPPA LRNYPEYRAT GSEEARRAII
RAGFAPGSEF LWDYHYLVYW DLTQRIYREE FDPAYDGALQ AGIPFCQEGT PNCDADYEYA
ERPRSVKEAV GRVSNTGRIG RPMITLHGDL DALLPVRVDS DVYRRLVERA GRAGIHRYIV
VGRGNHVDGL YDRYPERLRP ILPCYRAAFL ALDRYVEGRG SLPRNGFLPR PESGDVVNRC
DLGEVRVHRG
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