Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_2300 |
Symbol | |
ID | 4117519 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | - |
Start bp | 2313185 |
End bp | 2314027 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 638037081 |
Product | orotidine 5'-phosphate decarboxylase subfamily protein |
Protein accession | YP_645041 |
Protein GI | 108805104 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
TIGRFAM ID | [TIGR02127] orotidine 5'-phosphate decarboxylase, subfamily 2 |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.501998 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGGCGC TCGTAGAGTC GGCCCGCCGC AGGGACAGCG CGCTCGTGGT CGGTCTGGAC CCGGTCCCAA CCCGCCTTCC CCCCGGGCTC CTGGAGGGGC GGGAGGAGCA CGAGGCGGTG CTCGAGTTCT GCCGTGGCAT CCTCGAGGCC GTCTCGCCCT ACGCGGCGGC GGTGAAGGTG CAGCTGGCGT ACTTCGAGCG CCTGGGCCCG GAGGGGATGC GGGCGTATGC CGGGCTGGTC CGGGAGGCCG GCGCGGCGGG GCTCCCCGTC ATAGCCGACG CCAAGCGGGG GGACATCGCG GAGACGGCCG CGGCCTACGC CGAGGCGCAC CTGCGCGTCT ATGGGGCGCA CTGCGTGACG GTCAACCCCT ACATGGGGGC GGACGCGGTG CTCCCCTTCC TGGAGGAGGC GCGGCGGCTG GGGCGCGGCG GGGGGGTCTT CGTGCTGGTC GCGACCTCCA ACCCCTCGGC CGGGGCCTTC CAGGAGGCTT CGGAGCCCCC GGCCTCCGAG CTGGCGGCCC GGCTGGTCGC GGAGCTCGGC GATATGCAGA ACTGCGGCTA CCCGGACGCC GGGGCGGTGG TCGGGGTCAC CCGCCCGGAG GCCGGGCGCC GGGCCCGCCG GCTGCTGCCG CGCGCGCTCT TTCTCGCCCC CGGCTTCGGG GCGCAGGGAG GAGGGGTGCA GGGGGTGCGG GCGCTCCTCG ACGGCTCGGG CGGGGGGGTG CTCGTCTCCA GCAGCCGGGC GATACTCTAC GCCTGCGGGG GGAGGGGGGA CTACCGGGAT GCCGCCGCCG GGGCCGCGCG CGAGGCGAGG GACCTCCTGC GGGCCGCGGG GGTCAGGGTC TAG
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Protein sequence | MQALVESARR RDSALVVGLD PVPTRLPPGL LEGREEHEAV LEFCRGILEA VSPYAAAVKV QLAYFERLGP EGMRAYAGLV REAGAAGLPV IADAKRGDIA ETAAAYAEAH LRVYGAHCVT VNPYMGADAV LPFLEEARRL GRGGGVFVLV ATSNPSAGAF QEASEPPASE LAARLVAELG DMQNCGYPDA GAVVGVTRPE AGRRARRLLP RALFLAPGFG AQGGGVQGVR ALLDGSGGGV LVSSSRAILY ACGGRGDYRD AAAGAAREAR DLLRAAGVRV
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