Gene Rxyl_2275 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_2275 
Symbol 
ID4115218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp2287547 
End bp2288311 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content70% 
IMG OID638037054 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_645017 
Protein GI108805080 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGGTGAGA ATTTCGACGG CCCGCACGCC CTGATCACCG GCGGCAGCAC CGGCATCGGG 
GCCGCCATCG CCCGCCGCCT CTCAGCCTCC GGCGCCCGGC TGACCCTGGC CGGACGGCGC
CCCGAACCCC TGAAGAAAAC GGCGGCGAGC CTGAGAGAGG CCCAGGCGGT GCCGTTCGAC
GTAACCGATG AGGCCGCGGT GGAGGAAGGG GTCTCGATAG CCATCGAACG CTATGGCCCG
GTGGACATCC TGGTCAACAA CGCCGGGGCC GCCGGGTCCG CGCCGTTCAC GAAGACGACC
CCAGACGCCT GGCGCGCCAC ACTGGAGGCA AACCTGACCG GCGTGTTCCT GGTGAGCCGG
GCGGTATTGC CCGCGATGCT CGAGCGCGGG AGAGGGCGCA TCGTCAACAT CGCCAGCACC
GCCGGCCTGA AGGGCTATGC CTACGTCGCC GCCTACTGCG CCGCCAAGCA CGGGGTCATC
GGGCTCACCC GGTCGCTGGC GCTGGAGGTG GCGAGAGAGG GGATCACGGT GAACGCCGTC
TGTCCCGGCT ACACGGAGAC GGAGCTCCTG AAGCGCAGCG TCGCCAACAT CGTGGAGAAG
ACCGGCGCGA GCGAGGAGGA GGCGCGCGGG CAACTGCTTC GCGTCAACCC GCAGGGGCGC
TTCGTACGGC CGGAGGAGGT GGCGGAGACG GTCGCCTGGC TCGTCGGTCC GAACTCCGGG
GCCATAAACG GACAGGCCAT AGCCGTAGCA GGAGGGGAGG TTTAG
 
Protein sequence
MGENFDGPHA LITGGSTGIG AAIARRLSAS GARLTLAGRR PEPLKKTAAS LREAQAVPFD 
VTDEAAVEEG VSIAIERYGP VDILVNNAGA AGSAPFTKTT PDAWRATLEA NLTGVFLVSR
AVLPAMLERG RGRIVNIAST AGLKGYAYVA AYCAAKHGVI GLTRSLALEV AREGITVNAV
CPGYTETELL KRSVANIVEK TGASEEEARG QLLRVNPQGR FVRPEEVAET VAWLVGPNSG
AINGQAIAVA GGEV