Gene Rxyl_1923 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_1923 
Symbol 
ID4115539 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp1945348 
End bp1945545 
Gene Length198 bp 
Protein Length65 aa 
Translation table11 
GC content70% 
IMG OID638036708 
Productphage transcriptional regulator, AlpA 
Protein accessionYP_644682 
Protein GI108804745 
COG category 
COG ID 
TIGRFAM ID[TIGR01764] DNA binding domain, excisionase family 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.151509 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGAGAGGG ACAAGGAGTA CCTGAAGGTG CCGGAGGTGG CCGAGTACCT GCAGATCGGG 
CGCACCCGGG CCTACGAGCT GGTGGGTTCG GGGGAGATCC CGTCGGTGAG GATCGGGCGG
AGCCTCCGGG TGAGCCGCAG GGAGCTGGAG CGGTGGCTCG AGGAGCGGCG ACAGCCTGGG
ATCGGCGGCC GGGGTTAG
 
Protein sequence
MERDKEYLKV PEVAEYLQIG RTRAYELVGS GEIPSVRIGR SLRVSRRELE RWLEERRQPG 
IGGRG