Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_1888 |
Symbol | |
ID | 4115566 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | + |
Start bp | 1911410 |
End bp | 1912381 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638036676 |
Product | PfkB |
Protein accession | YP_644650 |
Protein GI | 108804713 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0524] Sugar kinases, ribokinase family |
TIGRFAM ID | [TIGR02152] ribokinase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.389987 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTCGAGCG AGGGGAGGGT CATGAGCAGG ATAGCTTCGG CGACCGTATG CGTAGTGGCC AGTTATGCTG TGGGATTGTC GATGGCTGTG GACCGATTCC CGCGTCCCGG GGAGACGAGA ATCGGCCACG GTTTCGTCCA AGGACCCGGT GGCAAGGGCA GCAACCAAGC CATCCAGGCC GCGAGGCTGG GGGCGCGGGT GGAGTTGGTG GCGTGCGTGG GCGACGACGC ATACGGTCGA GAGGCCCTCG ACCTTTGGTG TCGAGAGGGC ATCTCCACAG AGCATGTAGT CCAAGTAGGG GACCATCCAA CGGGGGTCGG CTTCATACTC GTGGACGAAT CCGGACAGAA TTCGATCGCC ATAGACCCCG GAGCGAACGA TGCCCTAGGA CCGCGGATGA TAGACGCCGC CCAAGGGGCG TTTGATCGCA GCGCCGTGTG CTTGGTGCAG TTGGAGATCT CGCTGGAGTC TGCTGCGCAT GCGCTGAGGA AGGCGAAGGA GGCAGGCTGT ATCACCGTCC TCAATCCGGC TCCCGCGCGG CGGATCCCCG ACGAGGTGTG GGGGTACGTC GATGTGATCA CGCCCAACGA GGGAGAGGCC GCCGTGGTGC TGGGCGAGGA GGGAAACGAG GAGAACCTCG GCAAACTGCT GTTGGAAAGG GTCAACTTGG CGGCGGTGGT GACGCTGGGC GAAAAGGGAG CGCTCGTGTT GGAGAAATCG GGGGCCGTCC AACGGGTGCC CGCATTCCCG GTACCTACCA GGGACACCAC CGGCGCGGGC GACGCCTTCT CCGGGGCACT CGGGTTGAGG CTGGCGCAGG GAAGCGACGT TGTCGAAGCA GCCCGGTGGG GCGCCGCGGC GGGCGCGCTG ACGTGCACGG TACCGGGTGT GGTACCGGCG CTGCCGGACA GGAAAGCGCT GCTCCGCTTG CTCTCGGGGA ACGAGGAATT GGCCGTGAGG GGTGGAGCAT GA
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Protein sequence | MSSEGRVMSR IASATVCVVA SYAVGLSMAV DRFPRPGETR IGHGFVQGPG GKGSNQAIQA ARLGARVELV ACVGDDAYGR EALDLWCREG ISTEHVVQVG DHPTGVGFIL VDESGQNSIA IDPGANDALG PRMIDAAQGA FDRSAVCLVQ LEISLESAAH ALRKAKEAGC ITVLNPAPAR RIPDEVWGYV DVITPNEGEA AVVLGEEGNE ENLGKLLLER VNLAAVVTLG EKGALVLEKS GAVQRVPAFP VPTRDTTGAG DAFSGALGLR LAQGSDVVEA ARWGAAAGAL TCTVPGVVPA LPDRKALLRL LSGNEELAVR GGA
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