| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1858 |
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| Symbol | |
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| ID | 4117414 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 1884098 |
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| End bp | 1885279 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 638036650 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_644624 |
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| Protein GI | 108804687 |
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| COG category | [K] Transcription
[R] General function prediction only |
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| COG ID | [COG1802] Transcriptional regulators
[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000920069 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTCCA CTGGTATCGA ACAAGATTCG ACGAGTGGTC GTTTTGTGGA CCGGGATCTC
TTTCGCGATG TCATCGGCCA CTTCGCCAGT GGTGTCACGA TCATTACGGC ACGCCACAAG
GAGACCAATT TCGGGATCAC CGCGAGCGCG GTGTGTTCGC TGTCGCTAGA CCCACCGATG
TTGCTAGTCT GCGTGAATAA GAAGACCGGT ACGCGACACG CCATAGCCGA GTCAAAAGCT
TTCGCAGTGA ACATCCTCCA CGAGGATCAG GGCGAACTCG CTGCGCGGTT CGCGCGGCCT
AATACAGACA AGTATCGGGG TGTTGAGATC GTCTATGGGG AGCTTGGAGA GCCGCTCTTG
AAGGACGCGC TGGCTCACCT CGAGTGCCGC GTTGTGGAAG AGGTGACAGC TGGAACCCAC
TCTGTGTTTC TTGCCGAGGT ACAGAATGCG TGGGCTAAAG AGGGAACCCC GCTGACGTAC
TTCAGGGGCA AGTTTGGGCG TTTCCAAGAG GCTAGCGACG AGAGAGTCTA CAGGGAAATA
CGGCAGCTGG TGCTTGAGCG CGATGTTCCG GCTGGACAGA GCATTACTAT CAACGATCTT
GCGTACCAAC TTGATGCTCC ACGCCAAGCG GTCTACTACG CGATGACCAG GCTAGAGGCT
GAGGGGCTCG TCACTCGGGA GGAGGAGGGT CGCTATGTCG TAAGCCCGCT CGACTCTGAG
ACACTGAATG GAGCTCTAGA CACTCGATGT GCACTAGAGG TCGGCGCTGC TGAGAAAGCA
GTTGGCCGCA TATCCAATGA AGAGCTTGCA GAATTACGAA GGCGTATGGA GGCGACGCTA
TTCTCGGGAG AGGGGCGACC GGTCTCCGCC GAGCGCTATG TGGAAGCCAA TGCTGCGTTT
CACGAGTACA CCGTCGCTCT CGCCAATAAT CCTACTCTGC TCGAAACTTA TCGGCAGCTT
ACAGCAGAAG CGGTCATGTC GAGCGCGCTA CGTGCGGCCC TAGAAGCTGA TGACGAGTTT
GCTGGCGAAC AACTTAAGAC CCTGGCCGAA GATCACGTCC GGCTTACGGA GGCCTTCGAG
GCTGGGGACC TGGAGGAGGC CAAGCGCGTC GTTCGTCGGC ACACCGAAGC AGCTAAGCGC
CTCGGACGAT ACTTGATGGA CAGTGCCGGA GGCAGCCTTT GA
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| Protein sequence | MDSTGIEQDS TSGRFVDRDL FRDVIGHFAS GVTIITARHK ETNFGITASA VCSLSLDPPM
LLVCVNKKTG TRHAIAESKA FAVNILHEDQ GELAARFARP NTDKYRGVEI VYGELGEPLL
KDALAHLECR VVEEVTAGTH SVFLAEVQNA WAKEGTPLTY FRGKFGRFQE ASDERVYREI
RQLVLERDVP AGQSITINDL AYQLDAPRQA VYYAMTRLEA EGLVTREEEG RYVVSPLDSE
TLNGALDTRC ALEVGAAEKA VGRISNEELA ELRRRMEATL FSGEGRPVSA ERYVEANAAF
HEYTVALANN PTLLETYRQL TAEAVMSSAL RAALEADDEF AGEQLKTLAE DHVRLTEAFE
AGDLEEAKRV VRRHTEAAKR LGRYLMDSAG GSL
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