Gene Rxyl_1787 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_1787 
Symbol 
ID4117329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand+ 
Start bp1809982 
End bp1810572 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content73% 
IMG OID638036584 
Producturacil-DNA glycosylase superfamily protein 
Protein accessionYP_644558 
Protein GI108804621 
COG category[L] Replication, recombination and repair 
COG ID[COG1573] Uracil-DNA glycosylase 
TIGRFAM ID[TIGR00758] uracil-DNA glycosylase, family 4 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.455491 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCGACC GTGAGGCCTG GGAGCGGCTG AGGCAAAGCT CGGCCGGGCG GTTCGGAGAG 
GACTCGGTCT TCGGGGAGGG AGAGCCCGGA GCCCGGCTCG CCATCGTGGG CGAGGCCCCG 
GGCGGGCGGG AGGTCGAGCT GGGCAGGCCG TTCGTCGGCA GGGCGGGGAG GCTGCTCGAC 
GAGCTGCTCG AGGAGGCGGG CATAGACCGC TCGGAGGTCT ACGTGACCAA CCTGGTAAAG 
GTACGCCCGA CGAAGGAGAG CGGCGGCCGC ATCCAGAACC GGCCGCCGCG CGCCGGGGAG 
GTCCGGGAGG GGCTGGAGGT GCTGGAGGAA GAGCTCCGGG CGATCGGCCC CGGGGCTCTC 
GTCCTGCTGG GGAGCACCCC GGCCAAGGCC CTCATAGACC GCTCGTTCAC CATGAGGGAG 
GGGCGGGGCA GGATCTTCGA GTCCAAAATA CTGGGGCTGC CCGCGCTGGC GACCTACCAC 
CCCGCCTACC TGCTCCGGGT GCGCGGCGCC GGGGGCGCGG ACTACGGGCG CCTCCGGCGG 
CAGGTGGTGG AGGACCTGCG CACCGCTTGG GAGCGGGCCA GCGGCGGATA A
 
Protein sequence
MGDREAWERL RQSSAGRFGE DSVFGEGEPG ARLAIVGEAP GGREVELGRP FVGRAGRLLD 
ELLEEAGIDR SEVYVTNLVK VRPTKESGGR IQNRPPRAGE VREGLEVLEE ELRAIGPGAL 
VLLGSTPAKA LIDRSFTMRE GRGRIFESKI LGLPALATYH PAYLLRVRGA GGADYGRLRR 
QVVEDLRTAW ERASGG