Gene Rxyl_1714 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_1714 
Symbol 
ID4116497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand+ 
Start bp1741447 
End bp1742376 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content65% 
IMG OID638036512 
Product2-hydroxy-3-oxopropionate reductase 
Protein accessionYP_644486 
Protein GI108804549 
COG category[I] Lipid transport and metabolism 
COG ID[COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 
TIGRFAM ID[TIGR01505] 2-hydroxy-3-oxopropionate reductase
[TIGR01692] 3-hydroxyisobutyrate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.280932 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCCGG CCCCGAGAGA ACGGAGGAAG GCAGGGATGG CGGAGAAGGT AGGGTTCATA 
GGGCTTGGGA TCATGGGACG GCCGATGGCC GAGAACCTCA TAAGAGCAGG CTACAGCCTC 
ACCGTCCACA ACCGCACCCA CCAGAAGGCC GAAGAGTTTG CGCAACAGAC CGGGGCGCGC 
ACCGCAAAGA GCCCCAAAGA GGTCGCCGGC CAGAGCGACA TCATCATCAC CATGCTCCCA 
GACTCCCCCG ACGTAGAGAG CGTCGTCGCC GGGGAGGGCG GGGTGCTCGA GGGGATGAGG 
GAGGGCTCCC TTCTCATCGA CATGTCCACC ATCTCCCCGG CCGTGGCCAG GCAGCTTGCC 
GCAAAGGCCA GGGAGAGGGG CGCCTCGATG CTGGATGCCC CGGTCTCCGG GGGAGACGTC 
GGGGCGCGGG AAGGGACGCT CTCCATCATG GTGGGAGGCA GCGAGGAGGA CTTCGGGAGG 
GCAAGGCCCC TCTTTGAGGT GATGGGCAAG ACCGTAACCC ATGTTGGCCC CAGCGGTGCG 
GGGCAAATCG TGAAGGCGGC AAACCAGATC GTGGTTGGAC TCACCATAGA GGCTGTGTGC 
GAGGCTCTGG TGCTTGGCTT GAGGGGAGGG GTCGAGCCGC AGAAGATCTT TGAGGTTCTC 
TGTGGGGGGT TGGCGGCAAA CAGGGTCATG GAGGTCAAGC GAGAGAAGTT CCTCTCCAGG 
GACTTCCGGC CGGGCGGCAA GGCGCGCTTT CACCGCAAGG ATCTCGGGAT AGCCCTAAAT 
ACCGGCCGGG AGTATGGCGT GGCGCTCCCG GCCGCGGCGC TCGTCGAGCA GCTCTTCGGG 
GCGCTCGAGG CCAAGGGGAG GGGCGACCTC GACCACTCCG CCCTCCTCCT GCTGGTGGAG 
GAGCTTTCGG GTCACCAAGG CCGGCAATGA
 
Protein sequence
MTPAPRERRK AGMAEKVGFI GLGIMGRPMA ENLIRAGYSL TVHNRTHQKA EEFAQQTGAR 
TAKSPKEVAG QSDIIITMLP DSPDVESVVA GEGGVLEGMR EGSLLIDMST ISPAVARQLA 
AKARERGASM LDAPVSGGDV GAREGTLSIM VGGSEEDFGR ARPLFEVMGK TVTHVGPSGA 
GQIVKAANQI VVGLTIEAVC EALVLGLRGG VEPQKIFEVL CGGLAANRVM EVKREKFLSR 
DFRPGGKARF HRKDLGIALN TGREYGVALP AAALVEQLFG ALEAKGRGDL DHSALLLLVE 
ELSGHQGRQ