Gene Rxyl_1700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_1700 
Symbol 
ID4116658 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp1724250 
End bp1724744 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content55% 
IMG OID638036498 
ProductGntR-like protein 
Protein accessionYP_644472 
Protein GI108804535 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000597096 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAGATCA TCCCCAACAA AGGCGCCATG GTCTGCTCTT TCAGCATCGA TGATGTCTGG 
GATATCTACG ATCTTCGGGC CGTCCTGGAG GGCTACGCAG CCCGGCGCGC CGCCAGCAAG
ATAAGCTCAA ACGAGCTTCA GTACTTGGAA AAGCTTGCCG GCGAGATGGA GAGAATCATC
GGTGTCTTCT CGGACCACGA GGAAGAAACA CGCAAGCTCG TGTCGCTAAA CAACGAATTT
CACGGCACCA TAGTCGTTGC CAGCCGCAAT AGAAGGCTTG AACGCCTCGT TCAGAGTACT
GTCCAGTTAC CCCTCGTTTT CAAAGCTTTC TTCTGGTACG GACCACACGA ACGGATGATC
TCCAACCACT ACCATCGACA GATCCTGAAG GCCCTTAGAT CCGGCGAAGC CGAAAGAGCA
GAGATCCTCA TGCGCGAGCA CGTCTACGAG GGCCGGGATT TCGTGATCCA GGCCCTCAGA
GAAGAAGCAC GGTAG
 
Protein sequence
MEIIPNKGAM VCSFSIDDVW DIYDLRAVLE GYAARRAASK ISSNELQYLE KLAGEMERII 
GVFSDHEEET RKLVSLNNEF HGTIVVASRN RRLERLVQST VQLPLVFKAF FWYGPHERMI
SNHYHRQILK ALRSGEAERA EILMREHVYE GRDFVIQALR EEAR